Gene SeD_A0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0027 
Symbol 
ID6875324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp29996 
End bp30514 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content56% 
IMG OID642783287 
Productfimbrial subunit 
Protein accessionYP_002213981 
Protein GI198245050 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.036036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.161213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAACG ATATCCTGTA CGGCATCGGG ATGCTGCTGG CGGCATCCGG CGTCCAGGCG 
CACGATGGCC GGGTCTATGT TTCCGGAACC ATCACGGACA ATACGTGTTC GCTCTCTCCT
GGCTCGGAAA ATATTAACGT GGCGATGGGC GCGGTTTCTC AACGGCAGTT TTATCGCGCG
GGCGACGGTT CCGCATGGCA ACCTTTTGCT ATCGATTTAC AAAACTGCGG CAGCACTGCC
AGCGGCGTAA CGGTCAGTTT TAGCGGTGCG GCGGACAGCC GTAATACGGA TTTATTGGCG
CTTACCGCAG GGGAAAGCGA CGCTTCAGGC ATTGGGATTG CGCTTTATGA TCAAAATAAA
ACTTTAATCC CACTGGGGCA AGAGAGTGAT GTGGTGACGC TCAGTCCGGG TCAGGCGTCG
GCGCATCTGC AATTTTACGC GCGTTATCTT GCCGATGGCG GCGCGGTAAC GCCCGGGGAC
GCCAATGCCT CCGCAACCTT CATTCTTGCC TATGAATAA
 
Protein sequence
MRNDILYGIG MLLAASGVQA HDGRVYVSGT ITDNTCSLSP GSENINVAMG AVSQRQFYRA 
GDGSAWQPFA IDLQNCGSTA SGVTVSFSGA ADSRNTDLLA LTAGESDASG IGIALYDQNK
TLIPLGQESD VVTLSPGQAS AHLQFYARYL ADGGAVTPGD ANASATFILA YE