Gene SeD_A0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0019 
Symbol 
ID6871015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp17869 
End bp19968 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content51% 
IMG OID642783279 
Productexochitinase 
Protein accessionYP_002213973 
Protein GI198242422 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3325] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.88911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAA GCAAACTGAT TCAAGGCGAT ACAATTACTG AAACTACTCA TGCAGCGAAT 
GGTTTTGACC CTGCAACAAG CGATGATAAA ATAAGCTATA CTTCCGCTCG TGTTGCGAAA
CCGGTATACA ATAAATATAA AAATTCCACG ACTAAACCGA AGGTATTCGG TTATTACACC
GACTGGTCAC AGTATGACAG CCGTCTGCAA GGCAATATGT CCCAACCGGG CCGTGGTTAT
GATTTAACCA AAGTTTCACC GACGGCTTAT GACAAACTGA TTTTTGGCTT TGTTGGCATC
ACCGGTTTCA GAAAAATTGA TACAGAAGAC CGCGATGTCG TAGCAGAAGC GGCAGCGCTG
TGCGGCAAAG TGAAATATGA GCCGACCTTC CTCGACCCAT GGGGCGACTT CCAGTCTTAT
ATCAACCTCG GCTTTGATGT CAGCGGCTGG GATGTGGATC CGAAGACTGT AACTCAGTCT
AACGCCAAGG GTCTGCTGGG CGCGCTGCGT GATATGCAGG CAAAAGCGAA AGCCGCAGGT
CACACGCTGG CGCTCTCCAT GAGTATCGGC GGCTGGAGCA TGAGTAACGG GTTCCACGAA
ACCGCCGCTT CTGACTCTTC TCGTAAAATC TTCGCCAAAG GCGTGGTGAA ACTGTTCAAA
CAGTTCCCGA TGTTCAGCGA AGTGGATATT GACTGGGAAT ACCCGAACAA TGAAGGGGCG
GGCAACCCGT TTGGTCCGGA AGATGGCGCT AACTACGCGC TGCTGATTGC CGAACTGCGT
AAACAGCTGG ATTCCGCTGG TCTGAGCAAT GTGAAGATCT CTATTGCCGC TTCTGCTGTC
ACTACTATTT TTGACTATGC GAAAGTAAAA GATCTGATGG CTGCTGGCCT GTATGGCATC
AACCTGATGA CCTATGACTT CTTCGGTACG CCGTGGGCGG AAACTCTGGG CCACCACACC
AACCGCAAAG CGCTGGAAGA GGGCGGCTGG GCTGTCGAAA CCATCGTTGA TCACCTGCTG
GCGGAAGGTT TCTCCGCTGA CCGTATCAAC ATCGGTTATG CCGGCTATAC CCGTAACGCT
CGTCAGGTAG AAATTGAATC CCTGTCGCCG CTGAAAGGTT CTTACAACCC AGGTTCAGGC
CCTACTACCG GTTCCTTTGA ATCCGGCACC AGTGAATGGT ATGACGTCAT TTATAGCTAC
CTGGATCTGG AAAACCAGAA AGGCCGTAAC GGTTTCAACG TTTACACCGA CCAGGTCGCT
GACGCTGACT ACCTGTATAG CCCGGAATCC AAACTGTTTT TATCCCTGGA TACGCCGCGT
ACTGTCAAAG CAAAAGGCGA ATATGCAGCG AAACTGGGCC TGGGCGGCGT GTTTACCTGG
ACTATCGATC AGGACAACGG CGTGCTGGTT AACGCCGTGC GTGAAGGTCT GGGTTATGAA
ATCGAATCTG AAGTTATCGA TATGGAACCG TTCTACTTTG AAGGTATCAA TGTAGAAAAA
GATGAAGAGC AGAGCGACAG CGACGACGCG CAGAAGGTCA ACCACGCGCC GAAAGCGGCG
ATTGAACTGC TGGTCGTAGG CGGATCTACG GTACAGCTGT CTGGCGCAGG TTCTTCTGAT
GAAGATAACG ATGAGCTGTC CTTTAGCTGG GGCGTGCCTT CTCAAATCAC TGTGGCAGAC
AAAACGGCTG AAATCATTGA GGTTGTGGTA CCGGAAGTTA GCGAAAAAAC AGCCTTCCAG
TTCACCCTGT TTGTACGCGA CTGCTACAAC GAACCGTCCT CTCAACAGCG CTTTGTTCTG
ACGGCTGTGC CTGCGCTATC TCAGGTTCAA CCGGAACCGG AAGAGGAAGA AGAGATTATC
GTTCCTGTAC CGGACGAGGA AGAAGATACC ACACCGGCTG AGGATGATAC GCCAGCAGAT
GACAAAACGT CACCTTACGC GCAGTGGGAT GCTTCTACCG TTTATGGCGC AAACTGGGGT
TCTTTCGAAA TCGTTAGCTG GAAAGGCCAT AACTATCAGG TGAAATGGTG GTCTATGGGC
AACCAGCCTG ACCTGAACTG CGGTGTCGGC GGTGCATGGA CCGATCTTGG CGCTTACTAA
 
Protein sequence
MATSKLIQGD TITETTHAAN GFDPATSDDK ISYTSARVAK PVYNKYKNST TKPKVFGYYT 
DWSQYDSRLQ GNMSQPGRGY DLTKVSPTAY DKLIFGFVGI TGFRKIDTED RDVVAEAAAL
CGKVKYEPTF LDPWGDFQSY INLGFDVSGW DVDPKTVTQS NAKGLLGALR DMQAKAKAAG
HTLALSMSIG GWSMSNGFHE TAASDSSRKI FAKGVVKLFK QFPMFSEVDI DWEYPNNEGA
GNPFGPEDGA NYALLIAELR KQLDSAGLSN VKISIAASAV TTIFDYAKVK DLMAAGLYGI
NLMTYDFFGT PWAETLGHHT NRKALEEGGW AVETIVDHLL AEGFSADRIN IGYAGYTRNA
RQVEIESLSP LKGSYNPGSG PTTGSFESGT SEWYDVIYSY LDLENQKGRN GFNVYTDQVA
DADYLYSPES KLFLSLDTPR TVKAKGEYAA KLGLGGVFTW TIDQDNGVLV NAVREGLGYE
IESEVIDMEP FYFEGINVEK DEEQSDSDDA QKVNHAPKAA IELLVVGGST VQLSGAGSSD
EDNDELSFSW GVPSQITVAD KTAEIIEVVV PEVSEKTAFQ FTLFVRDCYN EPSSQQRFVL
TAVPALSQVQ PEPEEEEEII VPVPDEEEDT TPAEDDTPAD DKTSPYAQWD ASTVYGANWG
SFEIVSWKGH NYQVKWWSMG NQPDLNCGVG GAWTDLGAY