Gene SeD_A0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0018 
Symbol 
ID6873040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp17045 
End bp17488 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content39% 
IMG OID642783278 
Producthypothetical protein 
Protein accessionYP_002213972 
Protein GI198241808 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.354059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTT ATATCATTAA TAGCAATTGC ATTTACAATG AAGGTAAATA TGAACTGAGG 
ACGGTCTCAA ATTCACAGGT TATTAAAATG ACTGCGATGA GAGCCAAATG TCTCAGTTTC 
ATCATCGAGA ATGCTCATCT GGAGATTATC GAGCGACAAA AAATAACCAC TGCGTTATGG 
GGAAGTCGAA GCCATTATGT TAATGATGCA AATCTAACGC AGATTCTCTA TTTAATCAGA 
CGTGACCTTA AAGCGCTTGG TATTAACGAT CTTTTTATTA CCATTCCAAG ACAAGGTCTC 
AAAGTGAATA GTGATATCGC CATTATCGCG ACGGATAGCG AAACAAAGGG AAGAAAAAAA 
CAGATTGTAC GGCAAACCAT CGCCGCCCTG ACGACCGTAT TTTCAGTAAC GTTAGGTTCT 
CTCATGTATC TGCATATTCA CTAA
 
Protein sequence
MKTYIINSNC IYNEGKYELR TVSNSQVIKM TAMRAKCLSF IIENAHLEII ERQKITTALW 
GSRSHYVNDA NLTQILYLIR RDLKALGIND LFITIPRQGL KVNSDIAIIA TDSETKGRKK 
QIVRQTIAAL TTVFSVTLGS LMYLHIH