Gene SeD_A0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0017 
Symbol 
ID6874338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp16495 
End bp17028 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content51% 
IMG OID642783277 
Producthypothetical protein 
Protein accessionYP_002213971 
Protein GI198243700 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.413407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAA TTATAGATGG AATTATTGCG CTTGAAGGCG GTTACGTATT TAACCCTAAA 
GATAAAGGCG GCGCCACCCA TTGGGGCATT ACCGAAGCCA CGGCGCGAGC GCATGGCTAT 
GCTGGCGATA TGCGGGATCT GACCCACGCT GAAGCCTACG CGATTCTCGA AGAGGATTAC 
TGGATAAAAC CAGGTTTTGA CGTCATCTCG ACGCTATCGT GGCCAGTCTC CTTCGAGCTG 
TGCGATGCGG CAGTCAACAT AGGCGCTTAC CACCCCAGCG CGTGGCTGCA ACGCTGGTTG 
AACGTCTTTA ATCACGAAGG TAAACGCTAC CCGGATATTC ATGTGGATGG CAATATTGGC 
CCGCGGACGC TTGCCGCTCT CGAACATTAT TTGGCCTGGC GAGGCCAGGA AGGGGAAGCC 
GTTTTGGTGA AAGCCCTCAA TTGCAGTCAG GGCACGTACT ACTTAAACGT TGCTGAGAAA 
AACCACAATA ACGAACAATT TATTTATGGC TGGATCAAGA ATAGAGTGAC CTAG
 
Protein sequence
MNPIIDGIIA LEGGYVFNPK DKGGATHWGI TEATARAHGY AGDMRDLTHA EAYAILEEDY 
WIKPGFDVIS TLSWPVSFEL CDAAVNIGAY HPSAWLQRWL NVFNHEGKRY PDIHVDGNIG 
PRTLAALEHY LAWRGQEGEA VLVKALNCSQ GTYYLNVAEK NHNNEQFIYG WIKNRVT