Gene SeD_A0012 details

Gene Information

• Locus tag: SeD_A0012
• Symbol: dnaK
• ID: 6873896
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 11594
• End bp: 13510
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642783272
• Product: molecular chaperone DnaK
• Protein accession: YP_002213966
• Protein GI: 198242776
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.276722
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 68
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGTAAAA TTATTGGTAT CGACCTGGGT ACTACCAACT CTTGTGTAGC GATTATGGAT 
GGAACGCAGG CACGCGTGCT GGAGAACGCC GAGGGCGATC GCACTACGCC TTCTATCATT 
GCTTATACCC AGGATGGTGA AACTCTGGTT GGTCAGCCGG CTAAACGTCA GGCAGTGACA 
AACCCGCAAA ACACCCTGTT TGCGATTAAA CGCCTGATTG GCCGCCGCTT CCAGGACGAA 
GAAGTTCAAC GTGACGTTTC TATCATGCCG TACAAAATCA TCGGCGCCGA CAACGGCGAC 
GCATGGCTTG ATGTGAAAGG TCAGAAAATG GCGCCGCCGC AGATTTCTGC CGAAGTGCTG 
AAGAAAATGA AGAAAACGGC TGAAGATTAT CTGGGCGAAC CGGTAACTGA AGCGGTTATC 
ACCGTACCGG CTTACTTTAA CGATGCGCAG CGTCAGGCTA CCAAAGATGC TGGTCGTATC 
GCGGGGCTGG AAGTTAAACG TATCATCAAC GAACCGACTG CCGCAGCGCT GGCTTACGGT 
CTGGATAAAG AAGTCGGCAA CCGTACTATC GCGGTTTACG ACCTCGGTGG TGGTACTTTC 
GATATCTCTA TTATCGAAAT CGACGAAGTT GATGGCGAAA AAACCTTTGA AGTTCTGGCA 
ACCAACGGTG ATACCCACCT GGGTGGTGAA GACTTCGATA CCCGCCTGAT CAACTACCTC 
GTTGACGAGT TTAAGAAAGA TCAGGGCATT GACCTGCGTA ACGATCCGCT GGCCATGCAG 
CGCCTGAAAG AAGCCGCAGA AAAAGCCAAA ATCGAGCTGT CTTCTGCGCA GCAGACCGAC 
GTGAACCTGC CGTACATTAC CGCAGATGCC ACCGGTCCGA AACACATGAA CATCAAAGTG 
ACTCGTGCAA AACTGGAAAG CCTGGTTGAA GATCTGGTGA ACCGTTCTAT CGAGCCGCTG 
AAAGTCGCAC TGCAGGACGC TGGCCTGTCC GTGTCTGATA TCAACGACGT GATCCTCGTC 
GGCGGTCAGA CCCGTATGCC AATGGTGCAG AAAAAAGTGG CTGAATTCTT TGGTAAAGAG 
CCGCGTAAAG ACGTTAACCC GGACGAAGCT GTGGCTATCG GCGCAGCGGT ACAGGGCGGC 
GTGTTGACCG GTGATGTGAA AGACGTACTG CTGCTGGACG TTACCCCGCT GTCTCTGGGT 
ATCGAAACGA TGGGTGGCGT GATGACTCCG CTTATCACCA AAAACACCAC CATCCCGACC 
AAGCACAGCC AGGTGTTCTC TACTGCGGAA GACAACCAGT CTGCGGTAAC CATCCATGTG 
CTGCAGGGTG AGCGTAAACG TGCGTCTGAT AACAAATCTC TGGGTCAGTT CAACCTGGAT 
GGCATCAACC CGGCGCCGCG CGGTATGCCG CAGATCGAAG TCACCTTCGA TATCGATGCT 
GACGGTATCC TGCACGTCTC CGCGAAAGAT AAAAATAGCG GTAAAGAGCA GAAGATCACT 
ATCAAGGCGT CTTCTGGTCT GAACGAGGAA GAAATTCAGA AAATGGTTCG CGATGCAGAA 
GCGAACGCTG AATCCGACCG TAAGTTCGAA GAGCTGGTTC AGACCCGTAA CCAGGGCGAC 
CATCTGCTGC ACAGCACCCG TAAGCAGGTT GAAGAAGCAG GCGATAAACT GCCGGCTGAT 
GACAAAACCG CTATCGAGTC TGCGCTGAAC GCGCTGGAAA CTGCCCTGAA AGGCGAAGAT 
AAAGCCGCTA TCGAAGCGAA AATGCAGGAA CTGGCGCAGG TTTCCCAGAA ACTGATGGAA 
ATCGCTCAGC AGCAACATGC GCAGCAGCAG GCTGGCTCCG CTGACGCTTC TGCAAACAAC 
GCGAAAGATG ACGACGTTGT CGACGCTGAG TTTGAAGAAG TAAAAGATAA AAAATAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAIMD GTQARVLENA EGDRTTPSII AYTQDGETLV GQPAKRQAVT 
NPQNTLFAIK RLIGRRFQDE EVQRDVSIMP YKIIGADNGD AWLDVKGQKM APPQISAEVL 
KKMKKTAEDY LGEPVTEAVI TVPAYFNDAQ RQATKDAGRI AGLEVKRIIN EPTAAALAYG 
LDKEVGNRTI AVYDLGGGTF DISIIEIDEV DGEKTFEVLA TNGDTHLGGE DFDTRLINYL 
VDEFKKDQGI DLRNDPLAMQ RLKEAAEKAK IELSSAQQTD VNLPYITADA TGPKHMNIKV 
TRAKLESLVE DLVNRSIEPL KVALQDAGLS VSDINDVILV GGQTRMPMVQ KKVAEFFGKE 
PRKDVNPDEA VAIGAAVQGG VLTGDVKDVL LLDVTPLSLG IETMGGVMTP LITKNTTIPT 
KHSQVFSTAE DNQSAVTIHV LQGERKRASD NKSLGQFNLD GINPAPRGMP QIEVTFDIDA 
DGILHVSAKD KNSGKEQKIT IKASSGLNEE EIQKMVRDAE ANAESDRKFE ELVQTRNQGD 
HLLHSTRKQV EEAGDKLPAD DKTAIESALN ALETALKGED KAAIEAKMQE LAQVSQKLME 
IAQQQHAQQQ AGSADASANN AKDDDVVDAE FEEVKDKK