| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0006 |
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| Symbol | |
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| ID | 6872167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 5966 |
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| End bp | 7423 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642783266 |
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| Product | amino-acid carrier protein AlsT |
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| Protein accession | YP_002213960 |
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| Protein GI | 198245613 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCAT CAACAAGAGG GACGTTAATG CCTGAGTTTT TCAGTTTTAT TAACGAAATA
CTCTGGGGCT CGGTAATGAT TTACCTGCTG CTCGGCGCAG GATGTTGGTT TACCTGGCGT
ACCGGATTCA TTCAATTTCG TTATATTCGC CAATTTAGCC GCAGTCTGAA AGGCAGCTTT
AGCCCGCAGC CAGGCGGCCT GACGTCATTT CAGGCGCTGT GTACCAGCCT CGCGGCGCGG
ATTGGCAGCG GTAATCTGGC CGGCGTGGCG CTGGCTATCG CCGCAGGCGG TCCCGGCGCG
GTATTCTGGA TGTGGGTCTC GGCCATCATT GGCATGGCGA CCTCCTTCGC CGAGTGTTCG
CTTGCCCAGC TTTATAAAGA ACGTGACCCG ACAGGCCAGT TCCGCGGCGG CCCGGCGTGG
TATATGGCGC GCGGGCTGGG AATGCGCTGG ATGGGCGTGG TTTTCGCCCT CTTTCTGCTC
GTCGCCTACG GGTTGATTTT TAATAGCGTG CAGGCGAATG CCGTCTCACG CGCGCTCCAT
TTCGCCTTCA ACATTCCGCC GCTTATCTCC GGCATTGCTC TGGCGTTCTG TGCCCTGTTA
ATTATCATCC GCGGCATAAA AGGCGTCGCC CGCCTGATGC AATGGCTGAT TCCCCTCATC
GCGTTATTGT GGGTCGCCGG CAGCGTATTC ATTTGCCTCT GGCATATTGA GCAAATGCCT
GGCGTTATCG CCTCGATAGT CAAAAGCGCA TTTGGCTGGC AGGAAGCCGC GGCAGGCGCA
GCCGGATATA CGCTCACCCA GGCTATTACC AGCGGTTTTC AGCGTGGGAT GTTCTCTAAT
GAAGCGGGAA TGGGGTCAAC GCCTAATGCG GCCGCAGCGG CAACGTCGTA TCCCCCTCAC
CCTGTCGCGC AGGGGATTGT GCAAATGATT GGCGTATTCA GCGACACCAT TATCATCTGT
ACCGCCAGCG CGATGATTAT CCTGCTGGCG GGGAATCACG CGTCCCATTC GTCAACAGAA
GGCATTCAGC TTCTCCAACA TGCAATGGTT TCGTTGACCG GTGAATGGGG CGCCAGTTTT
GTCGCGCTTA TCGTCATTCT GTTCGCGTTC AGTTCTATCG TCGCCAACTA TATTTACGCC
GAGAACAATC TGTTTTTTCT GCGGTTACAT AACGCAAAGG CCATCTGGCT ATTACGCCTT
GCGACGCTTG GCATGGTCAT CGCCGGTACG CTCATCAGTT TTCCGCTGAT ATGGCAGCTC
GCTGACATGA TCATGGCCTG TATGGCTATT ACCAATCTGA CGGCGATTTT GTTGCTCTCA
CCGGTGGTGT ATACCCTCGC CGGCGATTAT CTGCGACAAC GGAAACTGGG CGTAAGACCG
CAGTTCGATC CGCGGCGCTT CCCGGATATC GAACCACAAC TGGCGCCAGA TACCTGGGAT
GCGGCATCGC GCGATTAA
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| Protein sequence | MTASTRGTLM PEFFSFINEI LWGSVMIYLL LGAGCWFTWR TGFIQFRYIR QFSRSLKGSF
SPQPGGLTSF QALCTSLAAR IGSGNLAGVA LAIAAGGPGA VFWMWVSAII GMATSFAECS
LAQLYKERDP TGQFRGGPAW YMARGLGMRW MGVVFALFLL VAYGLIFNSV QANAVSRALH
FAFNIPPLIS GIALAFCALL IIIRGIKGVA RLMQWLIPLI ALLWVAGSVF ICLWHIEQMP
GVIASIVKSA FGWQEAAAGA AGYTLTQAIT SGFQRGMFSN EAGMGSTPNA AAAATSYPPH
PVAQGIVQMI GVFSDTIIIC TASAMIILLA GNHASHSSTE GIQLLQHAMV SLTGEWGASF
VALIVILFAF SSIVANYIYA ENNLFFLRLH NAKAIWLLRL ATLGMVIAGT LISFPLIWQL
ADMIMACMAI TNLTAILLLS PVVYTLAGDY LRQRKLGVRP QFDPRRFPDI EPQLAPDTWD
AASRD
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