| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_B0087 |
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| Symbol | |
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| ID | 6870935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011204 |
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| Strand | - |
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| Start bp | 48485 |
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| End bp | 50638 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642783225 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_002213919 |
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| Protein GI | 198241731 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 0.451504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTTT TTATCGCAGA AAAACCCGCA GTAGCAAATG ATATTGTTAA GGCACTTGGT
GGCAATTTTA CCCGCCATGA TGGCTGGTTT GAAAGTGATA ACGCCATTGT GACGAACTGT
TTTGGTCATA TTATCGAATC ACAACCGCCG GAAAACTATA ATCCTGAATA CAAAGCCTGG
AAGGTTGAAA CGCTTCCTTT ACGTCTTTAT CCCGTGAAGT ATCAGCCTGT TGAAAGTGCA
GCAAAACAGG TTAAAACGAT TCTCGAACTT ATCAGACGTG GAGACGTGAC TGAAATTGTT
CACGCTGGCG ATCCTGATGA TGAGGGACAG CTACTTGTTG ATGAAGTCTT GGAATATGCA
GGAAACACAA AACCCGTGAA GCGCGTTCTG ATAAACGACA ACACGCTTCC GGCAGTGAAA
AAGGCACTGG CAAATCTTAA AGATAATCGT GATTTCAAAG GGCTTTACCT TAAGGCGCTG
GCGCGTTCAG TTGCCGATGC CGTCTATGGC TTCTCCATGA CGCGTGCTTA CACCATTCCT
GCAAAAGCCA GAGGATATCA GGGCGTTCTG TCTGTCGGGC GCGTCCAGAC ACCCGTTCTT
GGCCTGATTG TGAATCGTAC CCGTGCTAAC CAGAACCATA AATCCAGTTT TTACTACACC
ATGACCGGAG TTTTTCAGCG TGGTGCTGAT GTTCTCAGGG CGAACTGGAA ACCAGGTGAA
TTTGCTCCGC TGACCGACCG TAAATTACTT GATAAGGCGT GGGCAGACGG AACGGCAGCA
TCCCTTGCAG GAAAACCGGC TACAGTTGAA GCAGCAGCAA CTGATGATAA AAAAACTGCT
GCACCGTTGC CATTTAACCT GGTCAGGCTC CAGCAATACA TGAACAAAAA GTTCAAAATG
ACAGCGCAAA AAACGCTGGA TGTTACGCAA CAACTACGCG AAAAATACAA AGCGATCACT
TATAACCGCT CTGATTGCTC ATATCTTTCT GATGAACAAT TCAGCGAAGC GCCACAGGTT
ATCGATGCCC TGAAATCAGT ATTTCCTCAG TCGCTGGATA TTGATTCCGC ACGTAAAAGC
AAGGCGTTTA ACAGTACAAA GGTGACTGCG CATACTGCGA TAATCCCGAC TGCCAGTGTG
CCTGATGTTA ACGCACTCAG CACCGACGAG CGCAATGTTT ACCTTGCGAT CGCACAACAC
TATCTTGTTC AGTTCATGCC TGAAAAAGCA TACCAGGAAG TATCGGTTGC CATTCAGTGT
GGTGATGAGT CGTTCTATGC TCGTGCCAGA AAAACAACTG ACAGCGGATT TGAGGCATTT
CTTGGTGCGG AAACCACAGA CGAAGGTGAA TCAGAAGATA ACGATGATTC CGCTTTTGAA
CTGCTCTGTA AAATTCGCAC AGGAGAAACA CTGACGACAA AAGAAGTTGT AGTTAATAAG
AAGAAAACGA CACCGCCGCC ATTATTTACT GAAGCCTCCT TGCTTGCTGC GCTTGTTCGT
GTCGCGGATT TTGTCACTGA CCCAACGATT AAAAAATTGT TGAAGGATAA AGATAAAGAC
AAAAAAGATG AACATGGCGG CATTGGTACG CCAGCTACCC GTGCAGCGAT TCTGGAAACG
TTGAAGAAAA GAAACTATAT CACGCTGGAA AAAGGGAAAC TTATTCCTAC TGATACCGGA
TATGCGCTTA TTGATGCCCT GCCTGGTATA GCGGTTAATC CTGATATGAC AGCATTATGG
TCTGAAAAGC AGGCTGCCAT AGAAAATGGC GACCTGACGG TTGAACAGTT TATTAATGAT
CTGTACGGTG AACTGACAGG CATGATTTCT GATGTTGACC TGGGCGAGAT GAAGATTGAA
CCCGCTGCGC CAGCAGGGCA GTTTCAACGC CTGGACTCTC CCTGCCCTTC CTGTGGTAAA
CATATTGTTA TCAGGCCGAA AGGTTATTTC TGTACCGGAT GTGAATTTAA AATCTGGAGT
GAGTTTTCTG GTAAGAAAAT CACCCAGGCA AAGGCCGAAA AACTGGTTAA ATCAGGGAAA
ACCGATTTGA TTAAGGGATT TAAAAAGAAA AGTGGTGGAA CGTATGATAC AGTTCTTGTC
CTTGAGGATA AGAAAACAGG GAAGCTGGGT TTTCCGGCAA GGGCTAAGAA GTGA
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| Protein sequence | MRLFIAEKPA VANDIVKALG GNFTRHDGWF ESDNAIVTNC FGHIIESQPP ENYNPEYKAW
KVETLPLRLY PVKYQPVESA AKQVKTILEL IRRGDVTEIV HAGDPDDEGQ LLVDEVLEYA
GNTKPVKRVL INDNTLPAVK KALANLKDNR DFKGLYLKAL ARSVADAVYG FSMTRAYTIP
AKARGYQGVL SVGRVQTPVL GLIVNRTRAN QNHKSSFYYT MTGVFQRGAD VLRANWKPGE
FAPLTDRKLL DKAWADGTAA SLAGKPATVE AAATDDKKTA APLPFNLVRL QQYMNKKFKM
TAQKTLDVTQ QLREKYKAIT YNRSDCSYLS DEQFSEAPQV IDALKSVFPQ SLDIDSARKS
KAFNSTKVTA HTAIIPTASV PDVNALSTDE RNVYLAIAQH YLVQFMPEKA YQEVSVAIQC
GDESFYARAR KTTDSGFEAF LGAETTDEGE SEDNDDSAFE LLCKIRTGET LTTKEVVVNK
KKTTPPPLFT EASLLAALVR VADFVTDPTI KKLLKDKDKD KKDEHGGIGT PATRAAILET
LKKRNYITLE KGKLIPTDTG YALIDALPGI AVNPDMTALW SEKQAAIENG DLTVEQFIND
LYGELTGMIS DVDLGEMKIE PAAPAGQFQR LDSPCPSCGK HIVIRPKGYF CTGCEFKIWS
EFSGKKITQA KAEKLVKSGK TDLIKGFKKK SGGTYDTVLV LEDKKTGKLG FPARAKK
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