Gene SeD_B0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0011 
Symbol 
ID6870831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand+ 
Start bp6255 
End bp6815 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content57% 
IMG OID642783165 
ProductRlgA 
Protein accessionYP_002213859 
Protein GI198241672 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.928686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTT ACGGCTATGC CCGCGTTTCA ACCAGCGATC AGGATCTTAC TCTGCAGACA 
CAAATTCTCC GCGCTGCTGG TTGTGAAATT ATTCGTGCAG AAAAAGCCAG CGGAAGCGGC 
CGGACCGGAA GGAGCGAGTT GCAGCTGCTG CTGGAGTTCC TGCGCCCTGG TGATACGTTG 
ATGGTGACAC GCGTGGATCG CCTGGCCCGC AGCATTAAGG ACCTGCAGGA CATTGTGTAT 
GCCCTGAATC AACAGGGCGT AACGCTCAGG GCAACAGAAC AGCCAGTGGA CACGCGTTCA 
GCTGCAGGCA AAGCCTTCCT CGATATGCTG GGTGTTTTCG CTGAGTTTGA AACCAATCTG 
AGACGTGAAC GCCAGATGGA AGGCATTGCC GCGGCGAAAG CCAGGGGCGT ATACCGGGGA 
AGGAAACCGT CCATAGATCC TGCTGAGGTA TATCGTCTGT ATACCATTGA GAAGATGGGA 
GCCACAGCCA TCGCCCGCCA GCTCGGGATT GGGAGGGCGT CAGTCTACCG GGCGCTGGAA 
AATTATGAGC AGCCGGCGTA G
 
Protein sequence
MALYGYARVS TSDQDLTLQT QILRAAGCEI IRAEKASGSG RTGRSELQLL LEFLRPGDTL 
MVTRVDRLAR SIKDLQDIVY ALNQQGVTLR ATEQPVDTRS AAGKAFLDML GVFAEFETNL 
RRERQMEGIA AAKARGVYRG RKPSIDPAEV YRLYTIEKMG ATAIARQLGI GRASVYRALE 
NYEQPA