Gene SeAg_B4676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B4676 
SymbolcycA 
ID6792953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp4567180 
End bp4568589 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content54% 
IMG OID642778750 
ProductD-alanine/D-serine/glycine permease 
Protein accessionYP_002149312 
Protein GI197248506 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00205284 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGATC AGGTAAAAGT CGCAGCCGAC GAACAGGCTC CGGCTGAACA GTCGCTACGG 
CGCAATCTTA CAAACCGTCA TATACAGCTT ATCGCTATTG GCGGCGCTAT TGGTACCGGT
CTGTTTATGG GATCGGGTAA AACGATCAGT CTCGCCGGAC CGTCGATCAT TTTTGTGTAT
ATGATCATCG GTTTTATGCT TTTTTTCGTG ATGCGCGCCA TGGGGGAATT GCTGCTCTCG
AATCTGGAAT ATAAATCGTT TAGCGATTTT GCTTCCGACC TGCTTGGCCC CTGGGCGGGA
TATTTCACCG GCTGGACGTA CTGGTTTTGC TGGGTAGTGA CCGGTATGGC TGACGTGGTG
GCGATTACCG CCTACGCGCA GTTCTGGTTT CCCGGCCTTT CCGATTGGGT CGCCTCGCTG
GCGGTAGTGA TCCTGCTGCT AAGCCTCAAC CTCGCCACCG TTAAAATGTT TGGTGAAATG
GAATTTTGGT TTGCTATGGT CAAAATCGTC GCCATCGTGG CGTTGATTGT GGTCGGGCTG
GTGATGATTG CGATGCACTT TAAATCGCCG ACCGGCGTTG AAGCGTCTTT CGCGCATCTG
TGGAATGACG GCGGCTGGTT CCCGAAAGGT ATTAGCGGGT TCTTTGCCGG TTTCCAGATT
GCGGTATTCG CCTTCGTGGG CATTGAGCTG GTCGGTACTA CCGCCGCAGA AACTAAAGAT
CCGGAAAAAT CGCTGCCGCG CGCGATTAAC TCAATACCGA TCCGTATCAT CATGTTCTAC
GTCTTTGCGC TGATTGTCAT TATGTCGGTG ACGCCGTGGA GTTCCGTGGT GCCGGATAAG
AGCCCGTTTG TTGAGCTGTT TGTACTGGTG GGTCTGCCTG CCGCCGCGAG CGTGATCAAC
TTTGTTGTGC TGACCTCGGC GGCGTCTTCC GCCAACAGCG GCGTCTTCTC GACCAGCCGT
ATGCTGTTTG GCCTGGCGCA AGAAGGCGTG GCGCCAAAAG CGTTCGCTAA GCTATCGAAA
CGCGCGGTAC CGGCGAAAGG CCTGACCTTC TCCTGTATCT GCCTGCTGGG CGGCGTGGTT
ATGCTGATGG TCAACCCGAG CGTGATTGGC GCATTCACCA TGATCACTAC GGTTTCGGCT
ATCCTGTTTA TGTTTGTCTG GACCATCATT CTGTGTTCAT ACCTGGTGTA CCGCAAAAAG
CGTCCCCACC TGCATGAAAA ATCCATCTAT AAGATGCCGC TCGGTAAGCT GATGTGCTGG
GTCTGCATGG CGTTCTTTGC ATTCGTGCTG GTATTACTGA CGCTGGAAGA CGATACGCGC
CAGGCGCTGA TCGTGACGCC GCTGTGGTTT ATCGCGCTGG GTCTGGGCTG GCTGTTGATA
GGTAAGAAAC GGATGGCGGG AATGCGTTAA
 
Protein sequence
MVDQVKVAAD EQAPAEQSLR RNLTNRHIQL IAIGGAIGTG LFMGSGKTIS LAGPSIIFVY 
MIIGFMLFFV MRAMGELLLS NLEYKSFSDF ASDLLGPWAG YFTGWTYWFC WVVTGMADVV
AITAYAQFWF PGLSDWVASL AVVILLLSLN LATVKMFGEM EFWFAMVKIV AIVALIVVGL
VMIAMHFKSP TGVEASFAHL WNDGGWFPKG ISGFFAGFQI AVFAFVGIEL VGTTAAETKD
PEKSLPRAIN SIPIRIIMFY VFALIVIMSV TPWSSVVPDK SPFVELFVLV GLPAAASVIN
FVVLTSAASS ANSGVFSTSR MLFGLAQEGV APKAFAKLSK RAVPAKGLTF SCICLLGGVV
MLMVNPSVIG AFTMITTVSA ILFMFVWTII LCSYLVYRKK RPHLHEKSIY KMPLGKLMCW
VCMAFFAFVL VLLTLEDDTR QALIVTPLWF IALGLGWLLI GKKRMAGMR