| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4568 |
|---|
| Symbol | |
|---|
| ID | 6795665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 4474012 |
|---|
| End bp | 4476441 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642778654 |
|---|
| Product | anaerobic dimethyl sulfoxide reductase chain a |
|---|
| Protein accession | YP_002149220 |
|---|
| Protein GI | 197250345 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAA AAAAATGGCT GAACACAACC ATAACCCGAC GTGATGCTAT TGTCGCTACT
GCAAAAGTAG GGGCGGCGGT GACGCTAAGC CAGGCGATTA CGCTGCCTTT TGCTACCACT
GCCCAGGCGC AGGATACCCC GATACCGAAG GATGCCAACG GCGAAACCGT CAGGCACAGC
GCCTGTCTGG TCAACTGTGG CAGTCGATGC CCGCTTAAGG TTATCGTGAA AAATGATCGC
ATTGTGCGTA TTGAACCGGA AGACGCGAAA GATGACGCGG TATTCGGCGA GCATCAGATT
CGTCCCTGCC TGCGTGGGCG TTCCAGTCGC TGGCGCGTCT ATAGCCCGGA TCGCATTAAG
TATCCGATGA AAAGAGTGGG AAAACGCGGT GAAGGAAAAT TTAAACGTAT TTCATGGGAT
GAGGCTACGG CCTTTATTGC GGCGGAATTA ACGCGTGTTA GCGAACAATA TGGCCGGGAA
GCTATTTATT ATAATTATCA ATCCGGCGCG TATTATCACA CGCAGGGATC GCCCGCATGG
AAACGATTGT TAAATCTCAC CGGCGGCTAT TTAAATTACC ATAATACCTA CTCGACCGCG
CAAATCGCGA CGGCAACGCC CTATATGCAT GGTACCTATG TCGGTAGCCA TTTTACGCAG
ATCGCGCATT CCGATCTGGT GGTGCTATTT GGCCTGAATC TCTCAGAAAC GCGGATGTCC
GGCGGCGGTC AGGTTGAAGA GCTGCGCCGG GCGCTGGAAA CCTCGAAAGC CCGAGTCATT
ATTATCGATC CACGCTATAC CGATTCGGTG ATTACCGAAC ACGCCGAATG GCTACCGATT
CGCCCAACCA CGGACGCTGC GTTAGTCGCC GGCATCGCGC ATACGCTGAT TACCGAACAG
CTTCTCGACG AGGCGCTGGT AAACCGCTAT TGCGTCGGCT ATGACCGTAG CACCTTGCCG
GACACGGCTG CGCCTAACGC CAGCTATAAA GATTATGTTC TTGGCACGGG CGATGATGGT
ATCGCGAAAA CCCCGGAATG GGCGGCGGAT ATCACCGGTA TTCCGGCAAC GCGTATTCGC
CAACTGGCGC GCGAAATCGC CTCGGCGCGC GCCTGCTATA TTTGCCAGGG CTGGGGGCCG
CAGCGTCATG CCAACGGCGA ACAAACCGTG CGTGCTATTC AGACGCTGCC AGCGTTAACC
GGCCACTTCG GGCGGCCCGG CACCAACAAT GGCAACTGGC CTTACGGTAC GCCGTATGGC
GTGCCATTGT TGCCCGTCGG TAAGAATCCG ATCACAACCT CTATTCCTTG CTATCTGTGG
ACGGACGCCA TTCAGCATCC GGAGAAAATG ACCGCGACGA CAATGGGTGT GAAAGGCGCG
GACAGGCTAA AAACCGGAAT TAAGCTGTTT TTCAACCAGG CCGGTAATAC CTTGCTGAAT
CAGCACGGCG AAACGAACCG CACCCGACAA ATTCTCGCGG ATGAATCGCT GTGTGAAACC
ATTATCGTGA TTGAAAACCA TATGACGCCC AGCGCGATGT ATGCGGATCT GCTGTTGCCG
GAGACCAGCT ATCTTGAGGC GGAAGACCTG GTGGACAGCT CCTATGCGGC GGGATCGCAT
AACTATATGA TTGCGATTCA GAAAACCGTT AAACCGATGT GGGAAGTGCG CAGCACGTAT
GACATCTGCG CGGATATCGC CGGGCATCTT GGACTGCGCG AGCAATATAC CGAGGGCCGA
ACTCAGGCGC AGTGGGCGGA GATGCACTAT CAGCAGATCC GTGAAAAACG TCCATACCTG
CCGGAGTGGA GCGTGGCGAA AGAGATGGGC GTGATTGACC AGCGTATCGC TACCGAGCAG
CAGAGCCTTG CGTTTGCCGA TTTCCGCGCC GACGCCGAGG CTAATCCACT CTCCACGCCG
TCGGGCAAAA TTGAAATTTA CTCCCAGGCG CTGGCGGATC TGGCGCAAGC GTGGACGTTG
CCAGAAGGCG AGCGAATTCC CGCATTGCCG GAATTTTGTC CGGCGAAAGA GTCGCATCTT
AACAAAGCGC TGACGGCGAA GTATCCGTTG CAGTTAAGCG GCTTCCATAC CAAAGGGCAT
ACCCACTCGA CCTACAGCAA TGTGCTGATG CTACATGAGG CGGTGCCGGA TGAAGTCTGG
ATTAACCCGA TTGACGCCAG CGCTCGCCAA TTGAAGTCCG GCGATCGGGT GCATGTATTC
AATGACCGCG GCGTGGTGGA GCTTCCCTGT AAAGTGACCC AGCGCATTTT ACCCGGCGTG
GCGGCGATGC CGCAGGGCGC GTGGACGCGG CTTGACGGCA ACGGCGTTGA TGTCGGCGGC
TGTATCAATA CGCTGACCAG CCACCACCCT TCGCCGCTGG CGAAAGGCAA TCCGCAGCAT
ACCAATCTGG TTGAAATTAA ACGCGCTTAA
|
|---|
| Protein sequence | MEIKKWLNTT ITRRDAIVAT AKVGAAVTLS QAITLPFATT AQAQDTPIPK DANGETVRHS
ACLVNCGSRC PLKVIVKNDR IVRIEPEDAK DDAVFGEHQI RPCLRGRSSR WRVYSPDRIK
YPMKRVGKRG EGKFKRISWD EATAFIAAEL TRVSEQYGRE AIYYNYQSGA YYHTQGSPAW
KRLLNLTGGY LNYHNTYSTA QIATATPYMH GTYVGSHFTQ IAHSDLVVLF GLNLSETRMS
GGGQVEELRR ALETSKARVI IIDPRYTDSV ITEHAEWLPI RPTTDAALVA GIAHTLITEQ
LLDEALVNRY CVGYDRSTLP DTAAPNASYK DYVLGTGDDG IAKTPEWAAD ITGIPATRIR
QLAREIASAR ACYICQGWGP QRHANGEQTV RAIQTLPALT GHFGRPGTNN GNWPYGTPYG
VPLLPVGKNP ITTSIPCYLW TDAIQHPEKM TATTMGVKGA DRLKTGIKLF FNQAGNTLLN
QHGETNRTRQ ILADESLCET IIVIENHMTP SAMYADLLLP ETSYLEAEDL VDSSYAAGSH
NYMIAIQKTV KPMWEVRSTY DICADIAGHL GLREQYTEGR TQAQWAEMHY QQIREKRPYL
PEWSVAKEMG VIDQRIATEQ QSLAFADFRA DAEANPLSTP SGKIEIYSQA LADLAQAWTL
PEGERIPALP EFCPAKESHL NKALTAKYPL QLSGFHTKGH THSTYSNVLM LHEAVPDEVW
INPIDASARQ LKSGDRVHVF NDRGVVELPC KVTQRILPGV AAMPQGAWTR LDGNGVDVGG
CINTLTSHHP SPLAKGNPQH TNLVEIKRA
|
|---|
| |