Gene SeAg_B4338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B4338 
SymbolhslV 
ID6796472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp4226881 
End bp4227411 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content54% 
IMG OID642778441 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_002149020 
Protein GI197248081 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0908599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAACAA TAGTAAGCGT ACGCCGTAAC GGCCACGTGG TAATCGCCGG TGATGGTCAG 
GCCACACTGG GTAACACAGT AATGAAAGGC AACGTGAAGA AAGTCCGCCG CCTCTACAAC 
GACAAGGTCA TTGCGGGCTT TGCGGGCGGT ACTGCGGATG CATTCACGCT GTTCGAGCTG 
TTTGAACGTA AACTGGAAAT GCATCAGGGG CACCTGGTCA AAGCCGCCGT TGAACTGGCG 
AAAGACTGGC GTACCGACCG TATGCTACGC AAACTGGAAG CGTTGCTGGC CGTCGCGGAT 
GAAACCGCCT CGCTCATCAT CACGGGTAAC GGCGATGTCG TGCAACCTGA AAACGATTTA 
ATTGCTATCG GCTCCGGCGG TCCTTATGCC CAGGCTGCCG CTCGCGCTCT GTTGGAAAAT 
ACCGAGCTCG GCGCGCGCGA AATTGCTGAA AAGGCGTTGG ATATTGCAGG CGATATCTGC 
ATTTACACCA ACCATTTCCA CACCATTGAA GAATTGACCG CCAAAGCGTA A
 
Protein sequence
MTTIVSVRRN GHVVIAGDGQ ATLGNTVMKG NVKKVRRLYN DKVIAGFAGG TADAFTLFEL 
FERKLEMHQG HLVKAAVELA KDWRTDRMLR KLEALLAVAD ETASLIITGN GDVVQPENDL 
IAIGSGGPYA QAAARALLEN TELGAREIAE KALDIAGDIC IYTNHFHTIE ELTAKA