Gene SeAg_B4212 details

Gene Information

• Locus tag: SeAg_B4212
• Symbol: fadA
• ID: 6792912
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: -
• Start bp: 4107873
• End bp: 4109036
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642778323
• Product: 3-ketoacyl-CoA thiolase
• Protein accession: YP_002148907
• Protein GI: 197248420
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02445] fatty oxidation complex, beta subunit FadA

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAGG TTGTCATTGT CGATGCTATT CGCACCCCGA TGGGCCGTTC GAAGGGCGGC 
GCGTTTCGCA ACGTGCGGGC AGAAGATCTC TCCGCCCACT TAATGCGTAG CCTGCTGGCG 
CGTAATCCGT CGCTTACAGC GGCGACCCTC GATGATATTT ACTGGGGCTG CGTACAACAA 
ACGCTGGAGC AAGGCTTCAA CATTGCCCGT AACGCCGCGC TGCTGGCAGA AATTCCCCAT 
TCGGTACCGG CGGTCACCGT CAACCGTCTG TGTGGTTCCT CGATGCAGGC GTTACACGAT 
GCAGCGCGAA TGATCATGAC CGGCGATGCG CAGGTTTGTC TGGTTGGCGG CGTGGAGCAT 
ATGGGGCACG TGCCGATGAG CCACGGCGTG GATTTTCACC CGGGTCTGAG TCGCAACGTC 
GCCAAAGCGG CAGGGATGAT GGGGCTAACG GCGGAAATGC TCTCCCGCCT GCACGGCATT 
AGCCGGGAAA TGCAGGACCA GTTCGCCGCC CGCTCTCACG CTCGCGCCTG GGCCGCTACC 
CAGTCTGGCG CATTCAAAAC GGAGATTATC CCGACTGGCG GTCATGATGC AGACGGCGTG 
TTGAAGCAGT TTAGCTACGA TGAAGTGATC CGCCCGGAAA CCACGGTCGA AGCGCTATCA 
ATGCTGCGTC CGGCATTTGA TCCGGTTAGT GGCACGGTCA CGGCGGGCAC CTCATCCGCG 
CTTTCCGATG GCGCAGCCGC CATGCTGGTA ATGAGCGAAA GTCGTGCCCG TGAGCTGGGC 
CTGAAACCTC GCGCCCGTAT TCGCTCAATG GCAGTGGTGG GTTGTGATCC GTCAATTATG 
GGTTACGGGC CGGTTCCGGC GTCAAAACTG GCGTTGAAAA AAGCGGGACT GTCAGCCAGC 
GATATCGATG TGTTTGAGAT GAACGAAGCG TTTGCCGCAC AGATCCTGCC ATGCATTATG 
GATCTGGGAT TGATGGAGCA GATAGACGAG AAGATCAACC TCAACGGCGG CGCGATCGCG 
CTTGGTCATC CGCTCGGCTG CTCCGGAGCA CGTATCAGCA CCACGCTTAT CAACCTGATG 
GAGCGCAAAG ACGCGCAGTT TGGTCTGGCG ACGATGTGTA TTGGTCTGGG TCAGGGCATC 
GCCACGGTGT TTGAGCGGAT TTAA 

 

Protein sequence

MEQVVIVDAI RTPMGRSKGG AFRNVRAEDL SAHLMRSLLA RNPSLTAATL DDIYWGCVQQ 
TLEQGFNIAR NAALLAEIPH SVPAVTVNRL CGSSMQALHD AARMIMTGDA QVCLVGGVEH 
MGHVPMSHGV DFHPGLSRNV AKAAGMMGLT AEMLSRLHGI SREMQDQFAA RSHARAWAAT 
QSGAFKTEII PTGGHDADGV LKQFSYDEVI RPETTVEALS MLRPAFDPVS GTVTAGTSSA 
LSDGAAAMLV MSESRARELG LKPRARIRSM AVVGCDPSIM GYGPVPASKL ALKKAGLSAS 
DIDVFEMNEA FAAQILPCIM DLGLMEQIDE KINLNGGAIA LGHPLGCSGA RISTTLINLM 
ERKDAQFGLA TMCIGLGQGI ATVFERI