Gene SeAg_B4143 details

Gene Information

• Locus tag: SeAg_B4143
• Symbol: rho
• ID: 6795251
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 4045331
• End bp: 4046590
• Gene Length: 1260 bp
• Protein Length: 419 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642778258
• Product: transcription termination factor Rho
• Protein accession: YP_002148846
• Protein GI: 197249760
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCTTA CCGAATTAAA GAATACGCCG GTTTCTGAGC TGATCACTCT CGGCGAAAGT 
ATGGGGCTGG AAAACCTGGC CCGTATGCGC AAGCAGGACA TTATTTTTGC CATCCTGAAG 
CAGCACGCAA AGAGTGGCGA AGATATCTTT GGCGACGGTG TGCTGGAGAT ATTGCAGGAT 
GGATTTGGTT TCCTCCGTTC TGCAGACAGC TCCTACCTCG CCGGTCCTGA TGATATCTAC 
GTTTCCCCCA GCCAAATCCG CCGTTTCAAC CTCCGCACTG GTGATACCAT TTCTGGTAAG 
ATTCGCCCGC CGAAAGAAGG TGAACGCTAT TTTGCGCTGT TGAAAGTTAA CGAAGTTAAC 
TACGACAAAC CGGAAAACGC CCGTAACAAA ATCCTCTTTG AGAACTTAAC CCCGCTGCAC 
GCAAACTCTC GTCTGCGTAT GGAGCGTGGT AACGGTTCTA CCGAAGACTT AACGGCGCGC 
GTTTTGGATC TGGCTTCGCC GATCGGTCGC GGCCAGCGCG GTCTGATTGT CGCGCCGCCG 
AAGGCGGGTA AAACCATGCT GCTGCAGAAC ATCGCGCAGA GCATCGCGTA TAACCACCCA 
GACTGCGTGC TGATGGTGCT GCTGATTGAC GAACGTCCGG AAGAAGTAAC CGAGATGCAG 
CGTCTGGTGA AAGGCGAAGT TGTTGCCTCT ACCTTTGACG AACCGGCATC CCGCCACGTT 
CAGGTTGCCG AAATGGTTAT CGAGAAGGCG AAACGTCTGG TTGAACACAA GAAAGACGTC 
ATCATCCTGC TCGACTCCAT CACCCGTCTG GCGCGTGCCT ACAACACCGT GGTGCCGGCT 
TCCGGTAAAG TATTGACCGG TGGTGTGGAC GCTAACGCCC TGCATCGTCC GAAGCGTTTC 
TTCGGCGCGG CGCGTAACGT GGAAGAGGGC GGTAGCCTGA CTATCATCGC GACGGCGCTG 
ATCGATACCG GTTCCAAGAT GGACGAAGTT ATCTACGAAG AGTTTAAAGG CACCGGTAAC 
ATGGAGCTGC ATCTCTCGCG TAAGATCGCT GAAAAACGTG TCTTCCCGGC TATCGACTAC 
AACCGTTCCG GTACCCGTAA AGAAGAGCTG CTCACCACTC AGGAAGAGCT GCAGAAAATG 
TGGATCCTGC GTAAAATCAT CCATCCGATG GGTGAAATTG ACGCGATGGA ATTCCTCATT 
AACAAACTGG CGATGACCAA AACTAATGAC GACTTTTTCG AGATGATGAA GCGCTCATAA 

 

Protein sequence

MNLTELKNTP VSELITLGES MGLENLARMR KQDIIFAILK QHAKSGEDIF GDGVLEILQD 
GFGFLRSADS SYLAGPDDIY VSPSQIRRFN LRTGDTISGK IRPPKEGERY FALLKVNEVN 
YDKPENARNK ILFENLTPLH ANSRLRMERG NGSTEDLTAR VLDLASPIGR GQRGLIVAPP 
KAGKTMLLQN IAQSIAYNHP DCVLMVLLID ERPEEVTEMQ RLVKGEVVAS TFDEPASRHV 
QVAEMVIEKA KRLVEHKKDV IILLDSITRL ARAYNTVVPA SGKVLTGGVD ANALHRPKRF 
FGAARNVEEG GSLTIIATAL IDTGSKMDEV IYEEFKGTGN MELHLSRKIA EKRVFPAIDY 
NRSGTRKEEL LTTQEELQKM WILRKIIHPM GEIDAMEFLI NKLAMTKTND DFFEMMKRS