Gene SeAg_B4016 details

Gene Information

• Locus tag: SeAg_B4016
• Symbol: uhpA
• ID: 6797244
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: -
• Start bp: 3915066
• End bp: 3915656
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642778132
• Product: DNA-binding transcriptional activator UhpA
• Protein accession: YP_002148726
• Protein GI: 197247639
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTACCG TTGCCCTTAT CGACGACCAC CTTATCGTCC GCTCCGGCTT TGCACAGCTA 
CTGGGGCTGG AACCTGATTT GCAGGTGGTC GCCGAATTTG GTTCCGGGCG CGAAGCGTTG 
GCAGGCTTGC CGGGGCGCGG CGTACAGGTG TGTATCTGCG ATATCTCGAT GCCGGATATT 
TCCGGACTGG AGCTGCTAAG CCAACTGCCA AAAGGGATGG CGACGATCAT GCTCTCGGTT 
CACGATAGCC CGGCGCTGGT GGAACAGGCG TTGAACGCCG GCGCGCGCGG TTTCCTCTCT 
AAACGCTGTA GTCCGGATGA ACTGATCGCC GCGGTGCATA CGGTGGCGAC GGGCGGCTGC 
TATTTGACCC CCGATATTGC CGTGAAACTG GCGGCGGGTC GGCAAGATCC GCTGACCAAA 
CGCGAGCGTC AGGTGGCGGA AAAACTCGCC CAAGGTATGG CGGTAAAAGA GATTGCCGCC 
GAGCTGGGGT TGTCGCCAAA AACGGTGCAT GTCCATCGCG CGAATCTGCT GGAAAAATTA 
GGCGTCAGCA ATGACGTTGA ACTGGCGCAT CGCATGTTTG ATGGTTGGTA A 

 

Protein sequence

MITVALIDDH LIVRSGFAQL LGLEPDLQVV AEFGSGREAL AGLPGRGVQV CICDISMPDI 
SGLELLSQLP KGMATIMLSV HDSPALVEQA LNAGARGFLS KRCSPDELIA AVHTVATGGC 
YLTPDIAVKL AAGRQDPLTK RERQVAEKLA QGMAVKEIAA ELGLSPKTVH VHRANLLEKL 
GVSNDVELAH RMFDGW