| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4014 |
|---|
| Symbol | uhpC |
|---|
| ID | 6796343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3912226 |
|---|
| End bp | 3913554 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642778130 |
|---|
| Product | regulatory protein UhpC |
|---|
| Protein accession | YP_002148724 |
|---|
| Protein GI | 197248421 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCGT TTTTAAAAGC CCCGGCCAAC GCGCCGCTCA TCACCGATAA GCACGAGGTT
GACGCCCGCT ATCGCTACTG GCGGCGGCAC ATCCTGATCA CCATTTGGTT GGGTTACGCG
CTGTTCTATT TCACCCGTAA AAGCTTTAAC GCCGCCGCGC CGGAAATCCT TGCCAGCGGC
ATTCTGAGTC GCAGCGATAT CGGCCTGCTG GCGACGCTGT TTTACATCAC CTACGGGGTG
TCGAAATTTG TTTCCGGCAT CGTTAGCGAT CGCTCTAACG CTCGCTATTT TATGGGCATC
GGGCTGATTG CGACCGGCGT AGTGAATATT CTGTTCGGCT TCTCGACCTC GCTGTGGGCC
TTTGCTCTGC TATGGGCGTT GAATGCCTTT TTCCAGGGGT TTGGATCGCC GGTTTGCGCC
CGTTTGCTGA CCGCCTGGTA CTCGCGTACC GAACGCGGCG GCTGGTGGGC GTTATGGAAC
ACCGCGCACA ATGTCGGCGG GGCGCTGATC CCTCTCGTTA TTGCCGCTGT CGCCCTGCAT
TATGGCTGGC GTGTCGGGAT GATGGTGGCC GGATTGCTTG CCATCGGGGT GGGCATGGTC
CTCTGCTGGC GGCTGCGCGA CCGTCCGCAG GCGATTGGTT TACCGCCGGT AGGCGACTGG
CGGCACGATG CGCTGGAGGT CGCCCAACAG CAAGAGGGCG CGGGGCTAAG CCGCAAAGAA
ATCCTCGCTA AATATGTGCT GTTGAATCCC TATATCTGGC TGCTTTCGCT GTGTTACGTC
TTAGTGTACG TGGTGCGTGC GGCGATCAAT GACTGGGGCA ACCTGTATAT GTCCGAGACG
CTGGGCGTGG ATTTGGTCAC GGCCAACACG GCAGTATCGA TGTTTGAGCT GGGGGGATTT
ATCGGCGCGC TGGTGGCGGG CTGGGGCTCG GACAAACTCT TCAACGGCAA CCGCGGACCG
ATGAATTTAA TCTTCGCCGC CGGGATTCTG CTCTCTGTGG GTTCGCTGTG GCTGATGCCG
TTCGCCAGTT ACGTGATGCA GGCGGCCTGT TTCTTCACCA CCGGTTTCTT TGTTTTCGGC
CCGCAGATGC TCATTGGCAT GGCGGCGGCG GAGTGCTCGC ATAAAGAGGC GGCGGGCGCG
GCCACCGGCT TTGTCGGCCT GTTCGCCTAT CTCGGCGCGT CGCTTTCCGG CTGGCCGTTA
GCGAAAGTGC TGGAGATCTG GCACTGGACC GGTTTTTTTG CGGTCATCGC CATCGCGGCG
GGGATCTCCG CGCTATTGCT GCTGCCATTT CTGAACGCCC AGGCCCCACG CGAGACCAGC
GAAGCGTGA
|
|---|
| Protein sequence | MLSFLKAPAN APLITDKHEV DARYRYWRRH ILITIWLGYA LFYFTRKSFN AAAPEILASG
ILSRSDIGLL ATLFYITYGV SKFVSGIVSD RSNARYFMGI GLIATGVVNI LFGFSTSLWA
FALLWALNAF FQGFGSPVCA RLLTAWYSRT ERGGWWALWN TAHNVGGALI PLVIAAVALH
YGWRVGMMVA GLLAIGVGMV LCWRLRDRPQ AIGLPPVGDW RHDALEVAQQ QEGAGLSRKE
ILAKYVLLNP YIWLLSLCYV LVYVVRAAIN DWGNLYMSET LGVDLVTANT AVSMFELGGF
IGALVAGWGS DKLFNGNRGP MNLIFAAGIL LSVGSLWLMP FASYVMQAAC FFTTGFFVFG
PQMLIGMAAA ECSHKEAAGA ATGFVGLFAY LGASLSGWPL AKVLEIWHWT GFFAVIAIAA
GISALLLLPF LNAQAPRETS EA
|
|---|
| |