| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3951 |
|---|
| Symbol | rph |
|---|
| ID | 6796804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3846046 |
|---|
| End bp | 3846762 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642778070 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_002148665 |
|---|
| Protein GI | 197249680 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCAG CAGGCCGTAG CGCTAATCAG GTGCGTCCCG TAACCCTGAC CCGTAACTAT
ACAAAACACG CTGAAGGCTC GGTACTGGTC GAATTTGGAG ATACCAAAGT GTTGTGCACC
GCCTCCATTG AAGAAGGCGT TCCACGTTTT CTGAAAGGGC AAGGCCAGGG GTGGATCACC
GCAGAGTATG GCATGTTGCC TCGCGCTACC CATACCCGTA ACGCGCGCGA AGCGGCAAAG
GGTAAGCAGG GCGGCCGTAC TATGGAAATT CAGCGTTTGA TCGCGCGTGC GCTGCGTGCG
GCGGTCGATC TGAAAACGCT CGGCGAATTT ACCATTACGC TGGACTGCGA TGTAATCCAG
GCCGATGGCG GTACGCGTAC AGCGTCTATT ACCGGTGCCT GCGTGGCGTT GGCGGATGCG
CTGAATAAAT TGGTTGCCAA CGGTAAGCTG AAAACCAACC CGATGAAAGG CATGGTGGCG
GCGGTTTCCG TAGGCATCGT TAACGGCGAA GCGATCTGCG ATCTGGAATA TGTTGAAGAT
TCCGCCGCAG AAACCGACAT GAACGTCGTG ATGACTGAAG ATGGCCGCAT TATTGAAGTT
CAGGGTACCG CGGAAGGCGA GCCGTTCAGC CATGAAGAAC TTCTCACTTT GTTGGCGCTG
GCCCGAGGGG GAATTGAATC CATTGTGGCG ACGCAGAAGG CGGCGTTAGA AAATTGA
|
|---|
| Protein sequence | MRPAGRSANQ VRPVTLTRNY TKHAEGSVLV EFGDTKVLCT ASIEEGVPRF LKGQGQGWIT
AEYGMLPRAT HTRNAREAAK GKQGGRTMEI QRLIARALRA AVDLKTLGEF TITLDCDVIQ
ADGGTRTASI TGACVALADA LNKLVANGKL KTNPMKGMVA AVSVGIVNGE AICDLEYVED
SAAETDMNVV MTEDGRIIEV QGTAEGEPFS HEELLTLLAL ARGGIESIVA TQKAALEN
|
|---|
| |