| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3941 |
|---|
| Symbol | waaA |
|---|
| ID | 6793740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 3838705 |
|---|
| End bp | 3839982 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642778061 |
|---|
| Product | 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| Protein accession | YP_002148656 |
|---|
| Protein GI | 197247988 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.503152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAT TGCTTTACAC CGCTCTTCTC TACCTTATTC AGCCTCTGAT CTGGATACGG
CTTTGGGTGC GTGGACGTAA AGCGCCAGCC TATCGTAAGC GCTGGGGTGA ACGCTACGGA
TTCTACCGCC GTCCGTTGAA ACCGGGCGGA ATCATGCTGC ATTCCGTCTC GGTGGGCGAA
ACTCTGGCGG CCATCCCATT GGTCCGCGCT CTACGTCATC GCTATCCCGA TCTGCCTATT
ACCGTAACGA CCATGACGCC GACCGGCTCG GAGCGCGTCC AGTCCGCCTT TGGCAACGAT
GTTCAGCACG TTTACTTGCC TTATGATTTG CCCGATGCGC TCAATCGTTT CCTCAATAAG
ATTGATCCTA AGCTGGTATT GATCATGGAG ACTGAGCTCT GGCCAAATCT GATTGCTGCG
CTACACAAAC GTCATATTCC GCTGGTTATC GCTAATGCGC GGCTTTCCGC CCGCTCCGCC
GCGGGTTATG CGAAGCTTGG CAAGTTTGTC CGTACGCTCC TGCGCCGTAT CACTCTGATT
GCCGCGCAAA ACGAAGAAGA TGGCGAACGC TTTGTGGCAT TGGGCGCGAA GAACAATCAG
GTCACGGTCA CCGGCAGTCT GAAATTTGAT ATTTCAGTTA CGCCGCAGTT GGCGGCTAAA
GCCGTTACGC TACGCCGCCA GTGGGCGCCG CACCGTCCGG TCTGGATTGC CACCAGCACC
CACGATGGCG AAGAGAGTAT CGTTATCGCC GCTCACCAGG CGTTATTACA TCAATTCCCG
AATTTATTAC TGATTCTGGT GCCCCGCCAT CCGGAGCGTT TCCCGGATGC TATCAATCTT
GTGCGTCAGG CAGGGTTAAG CTACATCACT CGCTCTTCGG GCGAAGTGCC GTCCGCCAGC
ACCCAAGTCG TGGTAGGCGA TACCATGGGC GAATTAATGT TGCTCTATGG CATTGCCGAT
CTCGCCTTTG TTGGTGGTTC GCTGGTTGAA CGCGGCGGTC ATAACCCGCT GGAGGCCGCC
GCTCATGCGA TTCCGGTACT GATGGGTCCG CATACCTTTA ACTTTAAAGA TATTTGCGCC
CGTCTGGATC AGGCGAGCGG ACTTATCACG ATTACCGATG CGGCTACGCT GGCAAAAGAA
GTTTCCTCTT TACTGACCGA CGCTGATTAT CGTAATTTCT ACGGACGTCA CGCAGTTGAA
GTGCTGTATC AAAATCAGGG CGCGCTCCAG CGTCTGCTGC AACTGCTGGA ACCTTATCTG
CCACCGAAAA CGCATTGA
|
|---|
| Protein sequence | MLELLYTALL YLIQPLIWIR LWVRGRKAPA YRKRWGERYG FYRRPLKPGG IMLHSVSVGE
TLAAIPLVRA LRHRYPDLPI TVTTMTPTGS ERVQSAFGND VQHVYLPYDL PDALNRFLNK
IDPKLVLIME TELWPNLIAA LHKRHIPLVI ANARLSARSA AGYAKLGKFV RTLLRRITLI
AAQNEEDGER FVALGAKNNQ VTVTGSLKFD ISVTPQLAAK AVTLRRQWAP HRPVWIATST
HDGEESIVIA AHQALLHQFP NLLLILVPRH PERFPDAINL VRQAGLSYIT RSSGEVPSAS
TQVVVGDTMG ELMLLYGIAD LAFVGGSLVE RGGHNPLEAA AHAIPVLMGP HTFNFKDICA
RLDQASGLIT ITDAATLAKE VSSLLTDADY RNFYGRHAVE VLYQNQGALQ RLLQLLEPYL
PPKTH
|
|---|
| |