| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3936 |
|---|
| Symbol | |
|---|
| ID | 6795890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3832883 |
|---|
| End bp | 3833896 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642778056 |
|---|
| Product | lipopolysaccharide 1,3-galactosyltransferase |
|---|
| Protein accession | YP_002148651 |
|---|
| Protein GI | 197249176 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGAA AATATTTTGA AGAAGAAGTC ATTCAACAGA CTTTAGATTA TAACTATGCA
CAACATAGTG ATGCTAATAA ATTTAATATA GCTTATGGGA TTGATAAAAA CTTTCTTTTT
GGCTGTGGTG TCTCTATTGC ATCGGTTCTC CTTGCTAACC CAGAGAAGGC GTTAGCTTTC
CATGTTTTTA CCGATTTCTT TGACTCTGAA GACCAGCAGC GATTTGAGGC ATTAGCAAAA
CAGTACGCTA CGCAGATTGT TGTTTACCTA ATCGACTGTG AGCGCTTAAA ATCGCTACCC
AGTACCAAAA ACTGGACCTA TGCAACATAC TTTAGATTCA TTATCGCCGA TTATTTTTCA
GATAAAACAG ATAGAGTACT TTATCTGGAT GCAGATATTG CATGTAAGGG GAGTATTCAG
GAACTTATTG ATCTTAATTT CGCTGAAAAT GAGATTGCTG CTGTCGTTGC TGAAGGCGAG
TTGGAATGGT GGACTAAGCG CTCGGTTAGC CTGGCAACGC CTGGGCTGGT TTCTGGCTAT
TTTAATGCCG GTTTTATTTT AATTAACATA CCTCTTTGGA CCGCAGAAAA TATCTCTAAG
AAAGCGATTG AAATGCTAAA AGATCCGGAG GTAGTACAGC GCATAACGCA CCTTGATCAG
GATGTATTAA ATATATTGTT AGTGAATAAA GCGCGTTTTG TTGATAAAAA ATTTAATACA
CAATTTAGTC TTAACTATGA ATTAAAAGAT TCAGTTATTA ATCCAGTCGA TGCTGAGACT
GTATTTGTTC ATTATATCGG ACCAACGAAG CCCTGGCATA GTTGGGGGGC TTACCCTGTG
TCACAATATT TTTTACAGGC TAAGAGCAAC TCACCATGGT CTCATTGTGC ACTTTTAAAT
CCAGTGACTA GCCATCAGTT ACGTTATGCG GCAAAGCATA TGTTTAATCA GAAGCATTAT
ACTTCGGGTG TAAATTATTA TATAGCCTAC TTTAAACGTA AACTTCTTGA ATAA
|
|---|
| Protein sequence | MSRKYFEEEV IQQTLDYNYA QHSDANKFNI AYGIDKNFLF GCGVSIASVL LANPEKALAF
HVFTDFFDSE DQQRFEALAK QYATQIVVYL IDCERLKSLP STKNWTYATY FRFIIADYFS
DKTDRVLYLD ADIACKGSIQ ELIDLNFAEN EIAAVVAEGE LEWWTKRSVS LATPGLVSGY
FNAGFILINI PLWTAENISK KAIEMLKDPE VVQRITHLDQ DVLNILLVNK ARFVDKKFNT
QFSLNYELKD SVINPVDAET VFVHYIGPTK PWHSWGAYPV SQYFLQAKSN SPWSHCALLN
PVTSHQLRYA AKHMFNQKHY TSGVNYYIAY FKRKLLE
|
|---|
| |