Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B3669 |
Symbol | ppiA |
ID | 6794619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 3537238 |
End bp | 3537810 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642777795 |
Product | peptidyl-prolyl cis-trans isomerase A (rotamase A) |
Protein accession | YP_002148391 |
Protein GI | 197249901 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.085019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAAT CGACTCTGGC GGCTGTCGCA GCTGTTTTCG CTCTTTCTGC TCTTTCTCCC GCAGCGTTGG CAGCAAAAGG CGATCCTCAT GTGCTGTTAA CCACCTCCGC CGGGAATATT GAGCTGGAGC TGAACAGCCA GAAAGCGCCG GTTTCTGTGA AAAACTTTGT CGATTACGTC AACAGTGGTT TCTATAACAA CACTACGTTT CACCGCGTTA TTCCTGGCTT TATGATTCAG GGCGGTGGTT TTAACGAGCA GATGCAGCAG AAGAAACCGA ATCCGCCGAT TAAGAATGAA GCCGACAACG GCCTGCGTAA TACTCGCGGC ACGATCGCGA TGGCGCGCAC CGCAGATAAA GATAGCGCCA CCAGCCAGTT CTTTATTAAC GTCGCGGATA ACGCTTTTCT CGACCACGGC CAGCGCGACT TTGGCTATGC GGTATTTGGT AAAGTGGTAA AAGGTATGGA TGTCGCCGAT AAAATCTCAC AGGTACCGAC GCACGATGTC GGGCCTTATC AGAATGTGCC GACAAAACCA GTCGTTATCC TTTCCGCGAA AGTCCTGCCA TAA
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Protein sequence | MLKSTLAAVA AVFALSALSP AALAAKGDPH VLLTTSAGNI ELELNSQKAP VSVKNFVDYV NSGFYNNTTF HRVIPGFMIQ GGGFNEQMQQ KKPNPPIKNE ADNGLRNTRG TIAMARTADK DSATSQFFIN VADNAFLDHG QRDFGYAVFG KVVKGMDVAD KISQVPTHDV GPYQNVPTKP VVILSAKVLP
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