Gene SeAg_B3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3350 
Symbol 
ID6793230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp3253209 
End bp3254192 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content52% 
IMG OID642777491 
Producttrap transporter solute receptor, dctp family 
Protein accessionYP_002148096 
Protein GI197248424 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACA CACGTTCATT CACAACATCA GCGGTATTAC TGGCCGGCTG TTTGCTGTTG 
GCATTTCCAG CGCTCGCCAA AACGACGCTG AAACTGAGCC ACAATCAGGA TAAAAGCCAC 
GCCGTTCACA AAGCGATGAG CTATCTGGCC GATAAAGCGA AAGCCTATTC GGACGGCGAA 
TTAAATATTC GTATTTACCC CAACGCCACG CTGGGCAACG AACGTGAATC GCTGGAATTG 
ATGAACTCCG GCGCTCTGCA AATGGTGAAA GTCAATGCGG CATCGCTGGA GTCTTTTGCG 
CCGGAATATA GCGTGTTTAG CCTGCCGTTT TTATTCCGCG ACCGCGATCA CTACTACAAC 
GTACTGAAAA GCGACTTAGG GAAACGCATT CTCGCGTCCT CCGAAAGCAA AGGCTTCGTC 
GGCTTAACCT GGTACGACGG CGGCGCCCGC AGTTTTTACG CTGGTAAGCC CATCACTCAA 
CCCGACGATT TAGCCGGTAT GAAAATCAGA GTGCAGCAAA GCCCCAGCGC TATCGCGATG 
GTGAAAGCGC TCGGCGGCGT GCCGACGCCG ATGGCGCAAG GCGAACTCTA TACCGCGCTC 
CAGCAAGGCG TGGTCGATGG CGGCGAAAAC AACCCCGTGG TTTATGCCGA TATGCGTCAT 
GCGGAGGTGG CGAAATTCTA TTCCCGCGAC GAGCACACGA TGGTGCCGGA TGTCCTGGTC 
ATCAGTACCA AAGTACTTAA CAAATTGAGC GATAAAGAGC GGAAAGCGTT ATATAAAGCC 
GCAGATGAAT CCATGCAGCA AATGAAAGAC GTCATCTGGC CCGCCGCGGA AAAAGAGGCT 
TATGAGAGCA TGAAGGCCAT GAACGCGACC GTTGTTGATA TTGATAAATC CGCGTTCAAA 
CAGCGTGTTA AGCCCTTGTT TGATGAGTTC CGCGCGAAAG ATGCTCAGTC AGCGAAGGAT 
CTGGAATACA TCGAGAATAT GTAA
 
Protein sequence
MKNTRSFTTS AVLLAGCLLL AFPALAKTTL KLSHNQDKSH AVHKAMSYLA DKAKAYSDGE 
LNIRIYPNAT LGNERESLEL MNSGALQMVK VNAASLESFA PEYSVFSLPF LFRDRDHYYN 
VLKSDLGKRI LASSESKGFV GLTWYDGGAR SFYAGKPITQ PDDLAGMKIR VQQSPSAIAM 
VKALGGVPTP MAQGELYTAL QQGVVDGGEN NPVVYADMRH AEVAKFYSRD EHTMVPDVLV 
ISTKVLNKLS DKERKALYKA ADESMQQMKD VIWPAAEKEA YESMKAMNAT VVDIDKSAFK 
QRVKPLFDEF RAKDAQSAKD LEYIENM