Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B3229 |
Symbol | |
ID | 6793256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 3145317 |
End bp | 3146177 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642777375 |
Product | mechanosensitive channel MscS |
Protein accession | YP_002147981 |
Protein GI | 197248261 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.550002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGATT TGAATGTTGT CGACAGCATA AATGGTGCGG GCACCTGGCT GGTACGCAAC CAGGCGTTAT TGCTCAGCTA TGCTGTGAAT ATTGTTGCGG CTATCGCTAT TATCATCATC GGCTTGATTG TAGCGCGTGT GATTTCCAAT ACGGTAAATC GTCTGATGCG TGCGCGTCAT ATTGATGCGA CAGTGGCCGA CTTTCTTTCT GCGCTGGTGC GCTATGGGGT TATCGCTTTT ACGCTGATTG CGGCTCTGGG TCGCGTGGGG GTACAAACGG CGTCGGTGAT CGCAGTACTG GGCGCCGCCG GTTTAGCCGT TGGCCTGGCA TTACAGGGAT CGCTTTCTAA CCTTGCGGCT GGGGTATTGC TGGTTATGTT CCGTCCGTTC CGCGCCGGTG AGTATGTCGA TTTGGGCGGC GTTGCCGGTA CGGTACTGAA CGTGCAAATC TTTTCCACGA CAATGCGCGC GGTAGACGGC AAAATTATTG TAATTCCGAA TGGCAAAATT ATCGCGGGAA ATATCATCAA CTATTCTCGT GAGCCGGTTC GCCGTAACGA ATTTATTATT GGGGTGGCCT ACGATTCGGA TATCGATCAG GTGAAACAGC TGCTAACGAC GATTATCGAG TCCGACGATC GTATTTTAAA AGATCGCGAA ATGACGGTGC GTTTGAATGA GCTGGGCGCC TCATCAATTA ATTTTGTGGT GCGTGTCTGG AGTAAAAGCA GCGACCTGCA AAATGTCTAT TGGGACGTGC TGGAACGTAT TAAACGTGAA TTCGACGCCG CTGGTATTAG CTTCCCGTAC CCGCAGATGG ACGTCAATTT TAAACGCGTG AAAGATAACG CCGCGGAGTA A
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Protein sequence | MEDLNVVDSI NGAGTWLVRN QALLLSYAVN IVAAIAIIII GLIVARVISN TVNRLMRARH IDATVADFLS ALVRYGVIAF TLIAALGRVG VQTASVIAVL GAAGLAVGLA LQGSLSNLAA GVLLVMFRPF RAGEYVDLGG VAGTVLNVQI FSTTMRAVDG KIIVIPNGKI IAGNIINYSR EPVRRNEFII GVAYDSDIDQ VKQLLTTIIE SDDRILKDRE MTVRLNELGA SSINFVVRVW SKSSDLQNVY WDVLERIKRE FDAAGISFPY PQMDVNFKRV KDNAAE
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