Gene SeAg_B3079 details

Gene Information

• Locus tag: SeAg_B3079
• Symbol: queD
• ID: 6794815
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 3004172
• End bp: 3004534
• Gene Length: 363 bp
• Protein Length: 120 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642777239
• Product: queuosine biosynthesis protein QueD
• Protein accession: YP_002147848
• Protein GI: 197247377
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0720] 6-pyruvoyl-tetrahydropterin synthase
• TIGRFAM ID: [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein; [TIGR03367] queuosine biosynthesis protein QueD

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.00219555
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCACCA CGTTGTATAA AGATTTCACC TTTGAAGCCG CTCACCGCCT GCCTCACGTG 
CCTGAAGGGC ATAAGTGCGG CCGCCTGCAC GGACACTCGT TTATGGTGCG TCTCGAAATT 
ACCGGTGAAG TCGATCCGCA TACCGGTTGG ATTATGGATT TCGCGGATCT CAAAGCGGCG 
TTTAAACCGA CTTACGATCG TCTTGATCAC TACTATCTGA ATGATATTCC AGGGCTGTCC 
AATCCCACCA GCGAAGTGCT GGCAAAATGG ATTTGGGATC AGGTTAAGCC CGTCGTGCCG 
CTACTGAGCG CCGTGATGGT GAAAGAGACC TGTACAGCCG GCTGCGTCTA TCGCGGCGAA 
TAA 

 

Protein sequence

MSTTLYKDFT FEAAHRLPHV PEGHKCGRLH GHSFMVRLEI TGEVDPHTGW IMDFADLKAA 
FKPTYDRLDH YYLNDIPGLS NPTSEVLAKW IWDQVKPVVP LLSAVMVKET CTAGCVYRGE