Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B3071 |
Symbol | cse |
ID | 6796100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 2993544 |
End bp | 2995103 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642777232 |
Product | crispr-associated protein, Cse1 family |
Protein accession | YP_002147841 |
Protein GI | 197251297 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAATT TTTCACTTTT AACAACGCCC TGGCTCCCCG TCCGTTTCAA AGATGGCTCG ACGGGTAAGT TGGCCCCCGT CGATCTGGCA GATGAAAACG TGGTGGATAT CGCCGCAACG CGAGCAGATT TGCAGGGAGC GGCCTGGCAG TTTCTGTTGG GATTGCTGCA ATGCAGTATC GCGCCGAAAA GATACAAAAA CTGGGAGGAT ATCTGGTTTG ATGGATTGCA TGCCGATGCG CTCCATAAGG CATTAGCACC GTTAGAACAC GCTTTTCAGT TTGGCGCGGA AACGCCGTCT TTTATGCAGG ATTTTGAAGA ATTACCCGAC AATAAAATAA CTATAGCTTC GCTATTACCG GAAACACCAG GTATTCAAAC TACTGAGTTA AATACAGATC ATTTTATCAA ACGTGGCGTA ATGGAATGTT TTTGCCCGCA TTGTGCCGCG TTGGCGTTGT TTTCAATGCA GCTTAACGCT CCTTCCGGCG GACAAGGCTA CCGCACTGGG CTGCGCGGCG GCGGGCCGCT GACTACATTG ATTGAATTGC AGGAATATCA GGGAGAGCGG CAAACGCCGC TCTGGCGCAA GCTGTGGCTC AACGTGATGC CGCAGGATGC TGCGGATCTG CCTTTGCCTG TCGTCTATGA TGCGGCTGTA TTTCCCTGGC TTGCCGCAAC ACGTACCAGC GAGCCACCAG CTCATACTAT TACAACAGAT GAGCAGGTAA ATAAATTACA AGCATACTGG GGGATGCCAC GCCGTATCCG TCTGGATTTC GCGACAATAC GTCAGGGAGT GTGCAATATC TGCGGTAATA ATAGCGATGA GCTGCTAATC CAGATGTTGG TCAAGAATTA TGGCGTTAAT TATGACCGCT GGCGGCACCC ATTAACACCA CATCGCCTGC AAATAAAGAA TAGTAAGGGA TTTGAACCTG TTATAACCCA ACCTGGTGGA CTTCTTTGGC GAGATTGGCT GGGACTAAGT CAAGAAAACC CGACGGAAAA GAATACCGAA TATCCGGCAC AGGTGATCAA AGTGTTTAAT GCCCGAGAGC TCAGGAATAT CAAAGTAGGC TTGTGGGGAT TTGGTGCCGA TTTCAAAAAA ATGAAAATTC GCTGCTGGTA TGAGCATCAC TTTCCGTTGC TGATGACGGA AGGTCTGATC CCTGATTTAC GTAAAGCAAC ACAAACTGCT ACCCGCCTCC TCAGCCTGCT GCGCGGTGCG CTAAAAGAAG CGTGGTTCGC CAATGCGAAG GATGCCCGCG GTGATTTCAG TTTTATCGAT ATTGATTTCT GGAACCTGAC GCAGGGGCGC TTTCTCAATC TGATCCACGA TCTGGAAAAC GGCCACAAGC CGGACGAAAG GCTGAATAAA TGGCAAAGAG AACTTTGGCT GTTTACCCGT TGTTACTTCG ATGATCACGT CTTTACCAAC CCCTACGAGA GCAGCGATCT GGAGCGCATC ATGAAGGCGC GCAAAAAATA TTTTACTTCA TCGGCGGAAA AGCAAAGCGC GAAAGCCGCC AAAGCAAAGA AGCAGGAGGC TGCTGAATGA
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Protein sequence | MDNFSLLTTP WLPVRFKDGS TGKLAPVDLA DENVVDIAAT RADLQGAAWQ FLLGLLQCSI APKRYKNWED IWFDGLHADA LHKALAPLEH AFQFGAETPS FMQDFEELPD NKITIASLLP ETPGIQTTEL NTDHFIKRGV MECFCPHCAA LALFSMQLNA PSGGQGYRTG LRGGGPLTTL IELQEYQGER QTPLWRKLWL NVMPQDAADL PLPVVYDAAV FPWLAATRTS EPPAHTITTD EQVNKLQAYW GMPRRIRLDF ATIRQGVCNI CGNNSDELLI QMLVKNYGVN YDRWRHPLTP HRLQIKNSKG FEPVITQPGG LLWRDWLGLS QENPTEKNTE YPAQVIKVFN ARELRNIKVG LWGFGADFKK MKIRCWYEHH FPLLMTEGLI PDLRKATQTA TRLLSLLRGA LKEAWFANAK DARGDFSFID IDFWNLTQGR FLNLIHDLEN GHKPDERLNK WQRELWLFTR CYFDDHVFTN PYESSDLERI MKARKKYFTS SAEKQSAKAA KAKKQEAAE
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