| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2717 |
|---|
| Symbol | cadB |
|---|
| ID | 6793932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 2660290 |
|---|
| End bp | 2661621 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642776899 |
|---|
| Product | lysine/cadaverine antiporter |
|---|
| Protein accession | YP_002147516 |
|---|
| Protein GI | 197249344 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCTG TCAAAAAGAT CGGGCTATTT GCCTGTACTG GCGTCGTTGC CGGTAATATG
ATGGGGAGCG GGATTGCATT ATTACCCGCC AACCTTGCCA GTATTGGTGG CATTGCCATC
TGGGGCTGGG TAATTTCTAT TATTGGGGCA ATGTCGCTGG CTTATGTTTA TGCGAGGCTG
GCAACCAAAA ACCCTCAACA GGGTGGCCCT ATCGCTTATG CTGGGGAAAT ATCTCCGGCG
TTTGGTTTCC AGACCGGCGT TCTTTATTAT CACGCAAACT GGATTGGTAA CTTAGCCATC
GGCATTACCG CTGTTTCTTA TCTTTCTACG TTCTTCCCGG CATTAAATAA TCCAATACCG
GCAGGTATTG CCTGTATTGC TATCGTCTGG CTGTTCACCT TTATTAATAT GCTGGGCGGG
GCCTGGGTCA GCCGCTTGAC AACGATTGGC CTATTTCTGG TGCTGATCCC GGTAGTCTTG
ACTGCAGTCG CCGGCTGGCA TTGGTTCGAT ATCGCGACCT ATCACGCGAA CTGGAACACG
TCCACGACGA CCGACTCTCA CGCCATTGTT AAAAGTATTC TGCTCTGCCT GTGGGCGTTC
GTTGGCGTTG AGTCTGCCGC CGTCAGCACC GGCATGGTGA AAAACCCGAA ACGCACCGTA
CCGCTGGCAA CCATGCTGGG TACCGCGCTG GCAGGCATCA TCTATATCGC CGCGACTCAG
GTTATCGCCG GGATGTTCCC TGCTTCCGTT ATGGCCTCTT CCGGCGCGCC GTTCGCTATC
AGTACCTCCA CGATTCTGGG TGGCTGGGCT GCGCCGCTGG TTTCCGCCTT TACCGCTTTC
GCCTGCCTGA CGTCTCTGGG CTCCTGGATG ATGCTGGTCG GCCAGGCTGG GGTTCGCGCC
GCCAACGACG GCAACTTCCC GAAAATTTAC GGTGAAATGG ATAAAAACGG TATTCCGAAA
AAAGGTCTGC TGTTGGCTGC GGTGAAAATG ACGGCGCTGA TGATTCTGAT CACCATCATG
AACTCCAGCG GCGGTAAAGC GTCCGACCTG TTCGGCGAAC TGACCGGGAT TGCCGTACTG
CTTACCATGC TGCCGTACTT CTACTCCTGT GTTGACCTGA TTCGCTTCGA AGGGTTCAAC
ATCCGTAACT CGGTAAGCCT GATTTGTTCT GTACTGGGCT GCGCATTTTG CTTCATCGCA
CTGATGGGCG CCAGCTCCTT CGAACTCTCC GGCACCTTTA TCGTCAGTCT GATCATCCTG
ATGTTCTACG GTCGCAAAAT GCACCAGCGC CAGAACAACG ACAGCGACAA CAATACGGCT
GAAGCGCTTT AA
|
|---|
| Protein sequence | MSSVKKIGLF ACTGVVAGNM MGSGIALLPA NLASIGGIAI WGWVISIIGA MSLAYVYARL
ATKNPQQGGP IAYAGEISPA FGFQTGVLYY HANWIGNLAI GITAVSYLST FFPALNNPIP
AGIACIAIVW LFTFINMLGG AWVSRLTTIG LFLVLIPVVL TAVAGWHWFD IATYHANWNT
STTTDSHAIV KSILLCLWAF VGVESAAVST GMVKNPKRTV PLATMLGTAL AGIIYIAATQ
VIAGMFPASV MASSGAPFAI STSTILGGWA APLVSAFTAF ACLTSLGSWM MLVGQAGVRA
ANDGNFPKIY GEMDKNGIPK KGLLLAAVKM TALMILITIM NSSGGKASDL FGELTGIAVL
LTMLPYFYSC VDLIRFEGFN IRNSVSLICS VLGCAFCFIA LMGASSFELS GTFIVSLIIL
MFYGRKMHQR QNNDSDNNTA EAL
|
|---|
| |