| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2643 |
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| Symbol | hda |
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| ID | 6796208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | - |
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| Start bp | 2573908 |
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| End bp | 2574633 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642776832 |
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| Product | DNA replication initiation factor |
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| Protein accession | YP_002147449 |
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| Protein GI | 197250088 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000240374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCATCCT GGGTTGAGGT ATCTCTGAAC ACACCGGCAC AGCTCTCTTT GCCACTTTAT
CTTCCTGACG ACGAAACTTT CGCAAGTTTC TGGCCGGGGG ATAACGCCTC TCTACTGGCC
GCGTTACAAA ACGTGTTGCG CCAGGAACAT AGTGGATATA TCTACCTTTG GGCGCGTGAA
GGCGCGGGCC GCAGCCATTT GCTGCACGCC GCCTGCGCTG AACTGTCGCA GCGTGGAGAT
GCGGTAGGCT ACGTCCCGCT CGATAAACGT ACCTGGTTCG TGCCGGAAGT GCTCGACGGT
ATGGAACACC TCTCGCTGGT GTGTATTGAT AACATTGAGT GTGTCGCTGG CGATGAACTG
TGGGAGATGG CGATCTTTGA TCTCTATAAC CGCATTCTGG AGTCCGGTAA GACGCGGTTA
TTGATCACCG GCGATCGTCC GCCAAGACAG TTAAATCTGG GCTTGCCCGA TCTCGCTTCC
CGTCTGGACT GGGGGCAAAT CTATAAACTC CAGCCTCTTT CCGATGAAGA CAAACTTCAG
GCGCTACAGT TGCGCGCCCG GTTACGGGGG TTTGAACTGC CGGAAGATGT CGGGCGGTTT
TTACTCAAAC GTCTTGATCG CGAAATGCGC ACGCTGTTTA TGACGCTGGA TCAGCTCGAT
CATGCGTCGA TCACTGCCCA GCGAAAACTG ACGATCCCGT TTGTCAAAGA GATCCTGAAA
CTGTAA
|
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| Protein sequence | MSSWVEVSLN TPAQLSLPLY LPDDETFASF WPGDNASLLA ALQNVLRQEH SGYIYLWARE
GAGRSHLLHA ACAELSQRGD AVGYVPLDKR TWFVPEVLDG MEHLSLVCID NIECVAGDEL
WEMAIFDLYN RILESGKTRL LITGDRPPRQ LNLGLPDLAS RLDWGQIYKL QPLSDEDKLQ
ALQLRARLRG FELPEDVGRF LLKRLDREMR TLFMTLDQLD HASITAQRKL TIPFVKEILK
L
|
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