Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B2519 |
Symbol | mnmC |
ID | 6793117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 2451283 |
End bp | 2453283 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642776714 |
Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
Protein accession | YP_002147338 |
Protein GI | 197247546 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACAAT ACGCCATACA ACCCGCCACA CTCGAATTTA ACGCTGAGGG TACACCTGTT TCCCGAGATT TTGATGATGT CTATTTTTCT AATGACAATG GACTCGAAGA GACACGCTAC GTTTTTCTTG GCGGCAATCG TCTTGCGGAG CGATTTCCCG TACATTCACA TCCATTATTT ATAGTCGCGG AAAGCGGTTT TGGCACCGGA CTTAACTTCC TGACGCTGTG GCAGGCGTTT GACAGCTTTC GTTCTGCGCA CCCACAGGCG ACGCTACAAA GGTTACATTT CATCAGTTTT GAGAAATTCC CGTTAACGCG CGACGATCTG GCGCTGGCGC ACCAACACTG GCCGGAGCTC GCGCCCTGGG CAGAGCAGCT GCAGGCGCAA TGGCCGCTGC CGCTCCCGGG GTGCCACCGC CTATTGCTGG ATCGGGGCCG GGTGACGCTG GATTTGTGGT TTGGCGATAT TAATGAGCTG ACCGACCAAC TGGACGCCAC GCTGAATCAA ACAGTCGACG CCTGGTTCCT CGACGGTTTT GCCCCGGCGA AAAATCCGGA TATGTGGACG CCAAACCTGT TTAACGCGAT GGCGCGGCTG GCGCGGCCCG GCGCAACGCT GGCGACGTTT ACCTCGGCGG GTTTCGTCCG TCGGGGATTA CAGGAAGCCG GTTTTACCAT GCAAAAACGC AAAGGCTTCG GACGTAAACG CGAGATGCTT TGCGGAGTGA TGGAACAACA CCTCATGCCG ACCCTTTCCG CGCCCTGGTT TTACCGCAGC GGAAGCGAAA AACGTGAAAC GGCGATCATT GGCGGCGGCA TCGCCAGCGC GCTGTTATCA CTGGCGTTAC TGCGTCGCGG CTGGCAGGTG ACGCTCTATT GCGCAGATGA TCAGCCCGCC CAGGGCGCTT CCGGTAATCG ACAGGGCGCG CTTTATCCGC TCCTTAGCAA ACATGACGCC GCCATTAATC GCTTTTTCCC GACCGCATTC ACCTTTGCCC GTCGCCTGTA TGATGCCCTG CCCGTCTCTT TTGATCATGA CTGGTGCGGC GTGACGCAGC TCGGATGGGA TGAGAAAAGC CAGCAGAAAA TCGCCCAGAT GCTGTCCCTG GCGCTGCCCG CCGGACTGGC CTCGGCGCTC AATGCCGAAG AGGCGGAACA GGCGGTTGGC GTGACGACAC GCTGCGGAGG AATTACCTAT CCGGAAGGCG GCTGGCTGTG CCCGGAACAA TTAACTCGCG CAGTCATCGC ACTGGCGACC GAACAGGGTT TACAAACGCG CTTTCGCCAT ACGCTCACGT CGCTCGTTGC GCAGGAGTCG CGCTGGCAAC TGCGCTTTAC GTCAGGTGAA ACCGCCAGCC ATGAGACCGT CGTTCTGGCG AACGGCCATC AGATTAACCG TTTTGATCAG ACCCAGCCGC TGCCGGTGTA TGCCGTCGGG GGGCAGGTCA GTCATATTCC CACCACCCCC GCCCTCTCGG CGTTGCGTCA GGTGTTATGC TACGACGGCT ATCTGACGCC GCAAAATCCG CATAATCAGC AGCACTGTAT TGGTGCCAGC TATCACCGGG GCGACGAAAG CACCGTCTGG CGCGAAGAAG ATCAGCGTCA GAACCGACAG CGTCTGCTTG ACTGTTTTCC GGATGCGAAA TGGGCCACAG AGGTTGACGT TAGCGGCAAC AGAGCCCGTT GCGGCGTGCG TTGCGCCACC CGCGACCATC TGCCGATGGT GGGCAATGTC CCGGATTACC ATGCCACGCT GACGCATTAC GCCGATTTAG CCGATAATAA AACGTCGGCG GCGCCTGCGC CTGTCTATCC GGGTTTATTT ATGCTCGGCG CGCTGGGATC GCGCGGTTTG TGCTCAGCGC CATTATGCGC AGAAATTCTA GCGGCGCAGA TGAGTAACGA GCCGATTCCA CTGGATGCCG GTACGCTGGC GGCGTTAAAT CCAAATCGGT TATGGGTGAG AAAGTTATTG AAGGGAAAAG CGGTGAAGTA A
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Protein sequence | MKQYAIQPAT LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLGGNRLAE RFPVHSHPLF IVAESGFGTG LNFLTLWQAF DSFRSAHPQA TLQRLHFISF EKFPLTRDDL ALAHQHWPEL APWAEQLQAQ WPLPLPGCHR LLLDRGRVTL DLWFGDINEL TDQLDATLNQ TVDAWFLDGF APAKNPDMWT PNLFNAMARL ARPGATLATF TSAGFVRRGL QEAGFTMQKR KGFGRKREML CGVMEQHLMP TLSAPWFYRS GSEKRETAII GGGIASALLS LALLRRGWQV TLYCADDQPA QGASGNRQGA LYPLLSKHDA AINRFFPTAF TFARRLYDAL PVSFDHDWCG VTQLGWDEKS QQKIAQMLSL ALPAGLASAL NAEEAEQAVG VTTRCGGITY PEGGWLCPEQ LTRAVIALAT EQGLQTRFRH TLTSLVAQES RWQLRFTSGE TASHETVVLA NGHQINRFDQ TQPLPVYAVG GQVSHIPTTP ALSALRQVLC YDGYLTPQNP HNQQHCIGAS YHRGDESTVW REEDQRQNRQ RLLDCFPDAK WATEVDVSGN RARCGVRCAT RDHLPMVGNV PDYHATLTHY ADLADNKTSA APAPVYPGLF MLGALGSRGL CSAPLCAEIL AAQMSNEPIP LDAGTLAALN PNRLWVRKLL KGKAVK
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