Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B2371 |
Symbol | rsuA |
ID | 6793946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 2289292 |
End bp | 2289987 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642776570 |
Product | 16S rRNA pseudouridylate synthase A |
Protein accession | YP_002147195 |
Protein GI | 197249585 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000147517 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTTG ATAAATTTAT CGCTCAGCAG CTTGGCGTCA GCCGCGCTAT TGCCGGGCGT GAAATTCGTG GTAACCGCGT TACCGTCGAT GGCGACATCA TTAAAAATGC GGCCTTCAAA CTGCTCCCGG AACATGCGGT TGCGTATGAC GGCAATCCCT TAGCGCAGCA ACACGGGCCA CGCTATTTTA TGCTTAACAA GCCGCAGGGA TACGTTTGTT CAACCGATGA TCCCGATCAT CCAACGGTAC TGTATTTCCT GGATGAGCCG GTGGCGTATA AGCTGCATGC CGCAGGACGT CTGGATATCG ATACTACCGG TCTGGTGTTA ATGACAGATG ACGGTCAGTG GTCGCACCGC ATTACGTCGC CGCGCCATCA CTGTGAAAAA ACCTATCTGG TGACCCTGGA GTCGCCGGTG GCCGACGATA CGGCAGCGCA ATTTGCGAAA GGCGTGCAGT TGCATAATGA AAAAGATCTC ACTAAACCCG CTACGCTGGA GGTGATAACG CCTGTGCAGG TCCGTCTGAC CATCAGCGAA GGCCGTTATC ATCAGGTGAA GCGGATGTTT GCCGCAGTAG GCAATCGCGT TGTGGAACTG CACCGCGAAC GGATTGGCGC CATTACGCTG GATGAGAATC TGGCTCCCGG CGAGTACCGC CCGTTGACTG AAGAAGAAAT CGCCAGCGTC GGCTAA
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Protein sequence | MRLDKFIAQQ LGVSRAIAGR EIRGNRVTVD GDIIKNAAFK LLPEHAVAYD GNPLAQQHGP RYFMLNKPQG YVCSTDDPDH PTVLYFLDEP VAYKLHAAGR LDIDTTGLVL MTDDGQWSHR ITSPRHHCEK TYLVTLESPV ADDTAAQFAK GVQLHNEKDL TKPATLEVIT PVQVRLTISE GRYHQVKRMF AAVGNRVVEL HRERIGAITL DENLAPGEYR PLTEEEIASV G
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