Gene SeAg_B2352 details

Gene Information

• Locus tag: SeAg_B2352
• ID: 6792570
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: -
• Start bp: 2269172
• End bp: 2270860
• Gene Length: 1689 bp
• Protein Length: 562 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642776552
• Product: PTS system fructose-specific transporter subunits IIBC
• Protein accession: YP_002147177
• Protein GI: 197248030
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1299] Phosphotransferase system, fructose-specific IIC component; [COG1445] Phosphotransferase system fructose-specific component IIB
• TIGRFAM ID: [TIGR00829] PTS system, fructose-specific, IIB component; [TIGR01427] PTS system, fructose subfamily, IIC component

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000000111546
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACGC TGCTGATAAT TGACGCTAAT CTCGGCCAGG CTCGCGCTTA CATGGCGAAA 
ACCCTGCTTG GAGCGGCGGC GCATAAAGCA AATCTGGAAA TTATCGACAA TCCGAATGAT 
GCTGAGCTGG CGATCGTGCT GGGCGAATCT CTGCCGAACG ACAATGCTCT GAACGGCAAA 
AAGGTTTGGC TGGGGGATAT TGGTCGCGCC GTCGCGCATC CGGAACTGTT TCTGAGTGAA 
GCCAAAAGCC ATGCGACCCC TTACAGCGCC CCTGCTGCGG CTGTTCCTGC GGCGAGCGGC 
GGTCCGAAAC GCGTGGTCGC GGTAACGGCC TGCCCGACCG GTGTCGCTCA TACTTTTATG 
GCGGCTGAAG CCATTGAAAC GGAAGCGAAA AAACGCGGCT GGTGGGTAAA AGTCGAAACG 
CGCGGCTCCG TGGGGGCCGG CAATGCCATC ACCCCGGAAG AGGTGGCGGA AGCGGATTTA 
GTGATTGTGG CGGCGGATAT CGAAGTGGAT CTGGCGAAGT TTGCCGGTCT CCCGATGTAC 
CGCACGTCGA CCGGCCTGGC GCTGAAAAAG ACGGCGCAGG AGCTGGATAA AGCCGTAGCG 
GAAGCAACGC CGTATCAACC GGCGGGTAAG GCATCGCAAG CGGCGACCGA AGGGAAGAAA 
GAGAGCGCTG GCGCATACCG GCATCTGTTG ACGGGCGTTT CTTACATGCT GCCTATGGTG 
GTTGCCGGGG GACTGTGTAT TGCGCTTTCC TTCGCCTTTG GTATTGAAGC CTTTAAGGTG 
CCGGACACGC TGGCGGCGGC GCTGATGCAG ATTGGCGGCG GTTCGGCGTT TGCGCTGATG 
GTGCCGGTAC TGGCGGGTTA TATCGCTTTC TCCATCGCGG ATCGCCCAGG CCTTACGCCA 
GGTCTGATTG GCGGTATGCT GGCGGTTAGC ACCGGTTCCG GTTTTATCGG CGGGATCATT 
GCCGGCTTCC TTGCCGGGTA TATGGCGAAG CTTATCAGTA CCAAACTGAA ACTTCCGCAA 
AGTATGGAAG CGCTGAAGCC AATCCTGATC ATCCCGTTAA TTTCCAGTCT GGTGGTGGGG 
CTGGCGATGA TTTACCTGAT CGGTAAACCG GTTGCCGGGA TTCTGGAAGG GCTCACCCAC 
TGGCTGCAAA CCATGGGGAC GGCAAACGCG GTGCTGCTGG GCGCGATTCT CGGCGGGATG 
ATGTGTACCG ACATGGGTGG CCCGGTGAAC AAAGCGGCGT ATGCGTTTGG CGTTGGTCTG 
CTGAGTACGC AAACTTACGC GCCGATGGCG GCGATCATGG CCGCAGGTAT GGTACCGCCG 
TTAGCGCTGG GTCTGGCAAC GATGGTGGCG CGTCGTAAGT TCGACAAAGC GCAGCAGGAA 
GGCGGTAAAG CGGCGTTGGT GCTGGGGCTG TGCTTTATCA CTGAAGGCGC TATTCCGTTT 
GCGGCGCGCG ACCCGATGCG TGTACTGCCG TGCTGTATCG TTGGCGGCGC GTTGACCGGG 
GCCATTTCTA TGGCGGTAGG CGCAAAATTG ATGGCGCCGC ATGGCGGTCT GTTTGTTCTG 
CTTATCCCAG GCGCAATTAC GCCGGTATTG GGATACCTGC TGGCAATTGT GGCCGGTACG 
CTGGTGGCAG GACTGGCTTA TGCCGTCCTG AAACGTCCGG AGACGGAAGT CGCGGCAAAA 
GCGGCGTAA 

 

Protein sequence

MKTLLIIDAN LGQARAYMAK TLLGAAAHKA NLEIIDNPND AELAIVLGES LPNDNALNGK 
KVWLGDIGRA VAHPELFLSE AKSHATPYSA PAAAVPAASG GPKRVVAVTA CPTGVAHTFM 
AAEAIETEAK KRGWWVKVET RGSVGAGNAI TPEEVAEADL VIVAADIEVD LAKFAGLPMY 
RTSTGLALKK TAQELDKAVA EATPYQPAGK ASQAATEGKK ESAGAYRHLL TGVSYMLPMV 
VAGGLCIALS FAFGIEAFKV PDTLAAALMQ IGGGSAFALM VPVLAGYIAF SIADRPGLTP 
GLIGGMLAVS TGSGFIGGII AGFLAGYMAK LISTKLKLPQ SMEALKPILI IPLISSLVVG 
LAMIYLIGKP VAGILEGLTH WLQTMGTANA VLLGAILGGM MCTDMGGPVN KAAYAFGVGL 
LSTQTYAPMA AIMAAGMVPP LALGLATMVA RRKFDKAQQE GGKAALVLGL CFITEGAIPF 
AARDPMRVLP CCIVGGALTG AISMAVGAKL MAPHGGLFVL LIPGAITPVL GYLLAIVAGT 
LVAGLAYAVL KRPETEVAAK AA