| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2211 |
|---|
| Symbol | |
|---|
| ID | 6795591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 2124104 |
|---|
| End bp | 2125165 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642776419 |
|---|
| Product | protein RfbU |
|---|
| Protein accession | YP_002147044 |
|---|
| Protein GI | 197248870 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00229627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTAA ACCTATCACG TTTAGGTAAA AGTGGTACGG GAATGTGGCA ATACTCGATT
AAATTTTTAA CGGCACTGCG AGAAATAGCT GATGTTGACG CAATAATCTG TAGCAAGGTA
CACGCTGATT ATTTTGAAAA GCTCGGTTAT GCAGTAGTTA CTGTTCCGAA TATTGTTAGC
AACACATCAA AAACATCGCG ACTTAGACCA TTAGTATGGT ATGTATATAG TTACTGGCTT
GCGCTGAGGG TTTTAATTAA GTTTGGTAAT AAAAAATTGG TGTGTACTAC GCATCACACT
ATCCCCTTAC TGAGAAACCA AACGATAACC GTACATGATA TAAGACCTTT TTATTATCCA
GATAGTTTTA TTCAGAAAGT GTATTTTCGC TTTTTATTAA AAATGTCTGT TAAGCGATGT
AAGCATATTT TAACGGTATC TTATACCGTT AAAGATAGCA TTGCTAAAAC TTATAATGTA
GATAGTGAGA AAATATCAGT AATTTATAAT AGCGTTAATA AATCTGATTT TATACAAAAA
AAAGAAAAAA AGAATTACTT TTTAGCTGTT GGAGCAAGTT GGCCACATAA AAATATTCAT
TCATTCATAA AGAATAAAAA AGTTTGGTCT GACTCTTATA ATTTAATTAT TGTATGTGGT
CGTACTGACT ATGCAATGTC TCTCCAACAA ATGGTCGTTG ATCTGGAACT AAAAGATAAA
GTGACTTTTT TACATGAAGT CTCATTTAAT GAATTAAAGA TTTTATATTC TAAAGCCTAC
GCGCTTGTTT ATCCTTCTAT TGATGAGGGT TTTGGCATAC CTCCTATTGA AGCGATGGCA
TCAAATACTC CAGTTATAGT GTCCGATATA CCGGTATTTC ATGAAGTGTT AACCAATGGT
GCATTATATG TGAATCCGGA TGATGAAAAA AGCTGGCAGA GTGCAATTAA AAATATAGAG
CAGTTGCCTG ATGCAATTTC CCGATTTAAC AACTATGTCG CACGGTATGA CTTTGATAAT
ATGAAGCAGA TGGTTGGCAA TTGGTTGACG GAATCAAAAT AA
|
|---|
| Protein sequence | MIVNLSRLGK SGTGMWQYSI KFLTALREIA DVDAIICSKV HADYFEKLGY AVVTVPNIVS
NTSKTSRLRP LVWYVYSYWL ALRVLIKFGN KKLVCTTHHT IPLLRNQTIT VHDIRPFYYP
DSFIQKVYFR FLLKMSVKRC KHILTVSYTV KDSIAKTYNV DSEKISVIYN SVNKSDFIQK
KEKKNYFLAV GASWPHKNIH SFIKNKKVWS DSYNLIIVCG RTDYAMSLQQ MVVDLELKDK
VTFLHEVSFN ELKILYSKAY ALVYPSIDEG FGIPPIEAMA SNTPVIVSDI PVFHEVLTNG
ALYVNPDDEK SWQSAIKNIE QLPDAISRFN NYVARYDFDN MKQMVGNWLT ESK
|
|---|
| |