| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2163 |
|---|
| Symbol | pduC |
|---|
| ID | 6794175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 2075799 |
|---|
| End bp | 2077463 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642776372 |
|---|
| Product | propanediol utilization dehydratase, large subunit |
|---|
| Protein accession | YP_002146997 |
|---|
| Protein GI | 197250586 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4909] Propanediol dehydratase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATCGA AAAGATTTGA AGCACTGGCG AAACGCCCTG TGAATCAGGA CGGCTTTGTT
AAGGAGTGGA TCGAAGAAGG CTTTATCGCA ATGGAAAGCC CGAACGACCC AAAACCGTCG
ATAAAAATCG TTAACGGCGC GGTAACCGAG CTGGACGGAA AACCGGTTAG CGAATTCGAC
CTGATCGACC ACTTTATCGC CCGCTACGGC ATCAACCTGA ACCGCGCCGA AGAAGTGATG
GCGATGGATT CGGTCAAGCT GGCTAACATG CTCTGCGATC CGAACGTCAA GCGCAGCGAA
ATCGTCCCGC TGACCACCGC CATGACCCCG GCGAAAATTG TTGAAGTGGT TTCGCATATG
AACGTCGTCG AAATGATGAT GTCGATGCAG AAAATGCGCG CTCGCCGCAC GCCGTCTCAG
CAGGCGCACG TCACCAACGT TAAAGACAAC CCGGTGCAAA TCGCCGCCGA CGCCGCCGAA
GGCGCATGGC GCGGGTTTGA CGAACAAGAA ACCACGGTTG CGGTAGCACG CTACGCGCCG
TTCAACGCCA TCGCGCTGTT GGTCGGCTCT CAGGTTGGTC GTCCGGGCGT ACTGACGCAG
TGCTCGCTGG AAGAAGCCAC CGAGCTGAAG CTCGGCATGC TGGGCCACAC CTGCTACGCC
GAAACCATCT CCGTTTACGG CACCGAGCCG GTCTTCACCG ACGGTGACGA TACACCATGG
TCGAAGGGCT TCTTAGCCTC TTCCTACGCC TCTCGCGGCC TGAAAATGCG CTTCACCTCC
GGTTCTGGCT CCGAAGTGCA GATGGGCTAC GCCGAAGGCA AATCCATGCT GTATCTGGAA
GCGCGCTGCA TCTATATCAC CAAAGCCGCG GGCGTTCAGG GGCTGCAAAA CGGCTCCGTA
AGCTGTATCG GCGTACCGTC TGCCGTGCCG TCAGGCATTC GTGCCGTGCT GGCGGAAAAC
CTGATCTGCT CGTCGCTGGA TCTGGAATGC GCCTCCAGTA ACGACCAGAC CTTCACCCAC
TCCGATATGC GTCGTACCGC GCGCCTGCTG ATGCAGTTCC TGCCGGGTAC CGACTTTATC
TCCTCCGGTT ATTCCGCGGT GCCGAACTAC GACAACATGT TCGCCGGTTC CAACGAAGAT
GCGGAAGACT TTGACGACTA CAACGTTATC CAGCGTGACC TGAAAGTGGA CGGTGGTCTG
CGCCCGGTTC GCGAAGAGGA CGTTATCGCC ATCCGTAACA AAGCCGCCCG CGCGCTGCAG
GCCGTGTTTG CCGGAATGGG ACTACCGCCG ATTACCGATG AAGAAGTTGA AGCCGCGACC
TATGCCCACG GTTCGAAAGA TATGCCGGAG CGTAACATCG TCGAAGACAT CAAGTTCGCC
CAGGAAATCA TCAATAAAAA CCGCAACGGT CTGGAAGTCG TTAAAGCGCT GGCGCAGGGC
GGGTTTACCG ACGTGGCCCA GGACATGCTC AACATCCAGA AAGCCAAGCT AACCGGCGAC
TATTTGCACA CCTCCGCCAT TATCGTCGGC GACGGACAAG TGCTCTCTGC GGTTAATGAC
GTCAATGACT ATGCCGGTCC GGCAACAGGT TATCGCCTGC AGGGAGAACG CTGGGAAGAG
ATTAAAAACA TCCCTGGCGC TCTTGATCCC AACGAGATTG ATTAA
|
|---|
| Protein sequence | MRSKRFEALA KRPVNQDGFV KEWIEEGFIA MESPNDPKPS IKIVNGAVTE LDGKPVSEFD
LIDHFIARYG INLNRAEEVM AMDSVKLANM LCDPNVKRSE IVPLTTAMTP AKIVEVVSHM
NVVEMMMSMQ KMRARRTPSQ QAHVTNVKDN PVQIAADAAE GAWRGFDEQE TTVAVARYAP
FNAIALLVGS QVGRPGVLTQ CSLEEATELK LGMLGHTCYA ETISVYGTEP VFTDGDDTPW
SKGFLASSYA SRGLKMRFTS GSGSEVQMGY AEGKSMLYLE ARCIYITKAA GVQGLQNGSV
SCIGVPSAVP SGIRAVLAEN LICSSLDLEC ASSNDQTFTH SDMRRTARLL MQFLPGTDFI
SSGYSAVPNY DNMFAGSNED AEDFDDYNVI QRDLKVDGGL RPVREEDVIA IRNKAARALQ
AVFAGMGLPP ITDEEVEAAT YAHGSKDMPE RNIVEDIKFA QEIINKNRNG LEVVKALAQG
GFTDVAQDML NIQKAKLTGD YLHTSAIIVG DGQVLSAVND VNDYAGPATG YRLQGERWEE
IKNIPGALDP NEID
|
|---|
| |