Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B2159 |
Symbol | |
ID | 6792624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 2072240 |
End bp | 2073151 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642776368 |
Product | regulatory protein PocR |
Protein accession | YP_002146993 |
Protein GI | 197248050 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4936] Predicted sensor domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.385139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCTG CGAGCGCTCT GAACTCAGAA CTCATTAATA AAATCGCACA GGATTTTGCA CAAGCCACCG GTCTGGCGGT TGTGGTTGTC AATATTCATG GTGATGAAAT ATCTGAGCTA TTCAATTTCA CGCCGTTTTG TCAGTTGATG CGGCAGCATC CCCAGCATAG TACACGTTGT CGTATGAGCG ATCGCTGCGG GGGACTGGAG GCATCGAAGT CCGATCAACC CTGTATTTAT CGTTGTCATG CAGGTCTAAC GGATTTTTCT ATTCCGCTGG TAATCGCAGG GCATTTAGTT GGCTTTGTTT TATGCGGGCA GGTTCGTTTA AGTAATGACG TGGAGCTGGT AAACATTCTT AATGTTGACG ATCGCTGGCA GGCTGATCCT GAGCTCTTGA ATGAATTTCG GAATGTGCCA GAGATGGACT ATTCACGCGT TATCGCTTCC GCCGATCTTC TTAAACTGAT AGTTGAGAAT TGCCTGAAAA AACAGCTCAA TTTCGTGGTT ATCAAAGACA ATCCGCAGCA ATCTGAGGCA AATAAAACCA CTCGTGGCCC CACTCCGCAT GACAGTAAAA TGAAAAAAGC GCTTCGCTAT ATTGATGCGC ATTTGTCCGA CGATCTTCGT CTTGAGGATG TCGCCTCACA TGTCTATCTC AGCCCCTATT ACTTCAGTAA GCTATTCAAG AAATATCAGG GAATCGGATT TAATGCGTGG GTAAACCGCC AGAGAATGGT TAGCGCCAGA GAATTGCTTT GCCATAGTGA CTGGAGTATT GCCAGTATTG CGCGTAATTT AGGCTTTTCG CAAACCAGCT ATTTTTGCAA AGTCTTCCGC CAGACCTATC AGGTTACGCC GCAGGCTTAT CGCCAGCAGA TAAATGAGAA TTCTCATCCT CCATCGTTAT GA
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Protein sequence | MISASALNSE LINKIAQDFA QATGLAVVVV NIHGDEISEL FNFTPFCQLM RQHPQHSTRC RMSDRCGGLE ASKSDQPCIY RCHAGLTDFS IPLVIAGHLV GFVLCGQVRL SNDVELVNIL NVDDRWQADP ELLNEFRNVP EMDYSRVIAS ADLLKLIVEN CLKKQLNFVV IKDNPQQSEA NKTTRGPTPH DSKMKKALRY IDAHLSDDLR LEDVASHVYL SPYYFSKLFK KYQGIGFNAW VNRQRMVSAR ELLCHSDWSI ASIARNLGFS QTSYFCKVFR QTYQVTPQAY RQQINENSHP PSL
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