| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B2139 |
|---|
| Symbol | cobS |
|---|
| ID | 6792839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 2056241 |
|---|
| End bp | 2056963 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642776349 |
|---|
| Product | cobalamin synthase |
|---|
| Protein accession | YP_002146974 |
|---|
| Protein GI | 197251362 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCTT TTATTAGCCG CTTGCCCGTG CCGTCACGCT GGTCGCAGGG ACTGGATTTC
GAGCAGTATT CGCGTGGGAT CGTGATGTTT CCCTTTATCG GGTTGATTCT GGGAGGGGTA
AGCGGCCTGA TTTTCATCCT CCTGCAACCC TGGTGTGGTA TTCCGCTAGC GGCGTTGTTC
TGTATTCTGG CGCTGGCGCT GCTGACCGGT GGTTTTCACC TGGATGGGTT GGCCGATACC
TGCGATGGTA TTTTTTCCGC GCGCCGCCGT GAGCGAATGC TGGAGATTAT GCGTGATAGT
CGTCTGGGAA CCCATGGCGG GCTGGCGCTT ATTTTTGTGC TACTGGCAAA AATTCTGGTG
GTCAGCGAAC TGGCGTTACG TGGAACGCCA ATGTTGGCGG CGTTGGCGGC GGCCTGTGCG
GCCGGACGCG GCAGCGCCGT TTTATTGATG TACCGTCATC GCTACGCCCG TGAAGAGGGG
CTTGGCAATG TATTTATCGG TAAAGTCAGC GGACGGCAAA CCTGCATTAC TCTGGGATTG
GCGGTAATCG TCGCCACGGT ATTACTGCCT GGTATGCAAG GACTGGCCGC AATGGTGGTC
ACATGCGCGG CGATTTTCAT CCTTGGCCAG TTGCTTAAAC GTACGCTTGG CGGTCAAACC
GGCGATACGC TGGGCGCGGC GATCGAACTT GGCGAACTGA TCTTTCTGCT GGCTCTATTA
TGA
|
|---|
| Protein sequence | MLAFISRLPV PSRWSQGLDF EQYSRGIVMF PFIGLILGGV SGLIFILLQP WCGIPLAALF
CILALALLTG GFHLDGLADT CDGIFSARRR ERMLEIMRDS RLGTHGGLAL IFVLLAKILV
VSELALRGTP MLAALAAACA AGRGSAVLLM YRHRYAREEG LGNVFIGKVS GRQTCITLGL
AVIVATVLLP GMQGLAAMVV TCAAIFILGQ LLKRTLGGQT GDTLGAAIEL GELIFLLALL
|
|---|
| |