Gene SeAg_B1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1752 
Symbol 
ID6795906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp1714495 
End bp1715553 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content40% 
IMG OID642775987 
Productsecretion system apparatus protein SsaU 
Protein accessionYP_002146621 
Protein GI197250158 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4792] Type III secretory pathway, component EscU 
TIGRFAM ID[TIGR01404] type III secretion protein, YscU/HrpY family 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000000152464 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA AAACAGAACA GCCTACAGAA AAGAAATTAC GTGATGGTCG TAAGGAAGGG 
CAGGTCGTCA AAAGTATCGA AATAACATCA TTATTTCAGC TGATTGCGCT TTATTTGTAT 
TTTCATTTCT TTACTGAAAA GATGATTTTG ATACTGATTG AGTCAATAAC TTTCACATTA 
CAATTAGTAA ATAAACCATT TTCTTATGCA TTAACGCAAT TGAGTCATGC TTTAATAGAG 
TCATTGACTT CTGCACTGCT GTTTCTGGGC GCTGGGGTAA TAGTTGCTAC TGTGGGTAGC 
GTGTTTCTTC AGGTGGGGGT GGTTATTGCC AGCAAAGCCA TTGGTTTTAA AAGCGAGCAT 
ATAAATCCGG TAAGTAATTT TAAGCAGATA TTCTCTTTGC ATAGCGTAGT AGAATTATGT 
AAATCCAGCC TGAAAGTTAT CATGCTATCT CTTATCTTTG CCTTTTTCTT TTATTATTAT 
GCCAGTACTT TTCGGGCGCT ACCGTACTGT GGGTTAGCCT GTGGCGTGCT TGTGGTTTCT 
TCTTTAATAA AATGGTTATG GGTAGGGGTG ATGGCTTTTT ATATCGTCGT TGGCATACTG 
GACTATTCTT TTCAATATTA TAAGATTAGA AAAGATCTAA AAATGAGTAA AGATGACGTA 
AAACAGGAGC ATAAAGATCT GGAGGGCGAC CCTCAAATGA AGACGCGGCG TCGGGAAATG 
CAGAGTGAAA TACAAAGTGG GAGTTTAGCT CAATCTGTTA AACAATCTGT TGCGGTAGTG 
CGTAATCCAA CGCATATTGC GGTTTGTCTT GGCTATCATC CCACCGATAT GCCAATACCA 
CGCGTCCTGG AAAAAGGCAG TGATGCTCAA GCTAACTATA TTGTTAACAT CGCTGAACGC 
AACTGCATCC CCGTTGTTGA AAATGTTGAG TTGGCCCGCT CATTATTTTT TGAAGTGGAA 
CGCGGAGATA AAATTCCTGA AACGTTATTT GAACCCGTTG CAGCCTTGTT ACGTATGGTG 
ATGAAGATAG ATTATGCGCA TTCTACCGAA ACACCATAA
 
Protein sequence
MSEKTEQPTE KKLRDGRKEG QVVKSIEITS LFQLIALYLY FHFFTEKMIL ILIESITFTL 
QLVNKPFSYA LTQLSHALIE SLTSALLFLG AGVIVATVGS VFLQVGVVIA SKAIGFKSEH 
INPVSNFKQI FSLHSVVELC KSSLKVIMLS LIFAFFFYYY ASTFRALPYC GLACGVLVVS 
SLIKWLWVGV MAFYIVVGIL DYSFQYYKIR KDLKMSKDDV KQEHKDLEGD PQMKTRRREM 
QSEIQSGSLA QSVKQSVAVV RNPTHIAVCL GYHPTDMPIP RVLEKGSDAQ ANYIVNIAER 
NCIPVVENVE LARSLFFEVE RGDKIPETLF EPVAALLRMV MKIDYAHSTE TP