Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1647 |
Symbol | |
ID | 6795576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 1614354 |
End bp | 1615226 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642775882 |
Product | putative LysR substrate binding domain |
Protein accession | YP_002146518 |
Protein GI | 197248990 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0636291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCTGA CGCAACTGGA AATGTTTAAC GCTGTCGCTC TGACGGGCAG CATTACGCAG GCGGCGGCAA AAGTGCACCG CGTTCCGTCC AACCTGACCA CGCGTATCCG TCAGCTTGAA GCCGACCTCG GCGTCTCTCT GTTTATTCGC GAAAACCAGC GACTCAGGCT GTCACCAGCC GGGCATAACT TTTTACGTTA CAGCCAGCAG ATCCTGGCGC TGGTCGATGA AGCCCGCATG GTGGTTGCCG GAGAGGAACC GCAAGGACTG TTTTCACTCG GCGCGTTAGA AAGTACTGCC GCCGTACGTA TCCCCGCGCT GCTGGCGGGT TATAACCAGC GTTACCCTAA AATTCAGTTC GCGTTAACGA CCGGTCCTTC CGGCGCCATG CTGGATGGCG TGCTCGAGGG AAAGCTGAAC GCCGCCTTTA TTGATGGCCC GCTAATGCAT CCGGGGCTGG AAGGTATACC GGCTTACCAG GAAGAGATGA TGATCGTCGC GCCACACGGC CATTCCGTCG TTTCGCGGGC CAGCGAGGTG AATGGTTATA ACATCTATGC TTTTCGCGCC AACTGTTCTT ACCGACGGCA TTTCGAAAGC TGGTTTCATG CCGATGGCGC GACCCCCGGT ACGATTCACG AAATGGAGTC ATATCATGGA ATGTTGGCGT GCGTAATTGC CGGCGCAGGT ATTGCGCTGA TGCCAGCAAG TATGCTCAAC AGTATGCCAG GACATCATCA GGTGGAAGCC TGGCCGTTGG CGGAGAAGTG GCGCTGGCTT AACACATGGC TAATGTGGCG GCGCGGGGCG ATGACGCGTC AGCTTGAGGC CTTTATCGAG TTACTTAACG CCCAACTGGC GAGCGTCGAC TGA
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Protein sequence | MDLTQLEMFN AVALTGSITQ AAAKVHRVPS NLTTRIRQLE ADLGVSLFIR ENQRLRLSPA GHNFLRYSQQ ILALVDEARM VVAGEEPQGL FSLGALESTA AVRIPALLAG YNQRYPKIQF ALTTGPSGAM LDGVLEGKLN AAFIDGPLMH PGLEGIPAYQ EEMMIVAPHG HSVVSRASEV NGYNIYAFRA NCSYRRHFES WFHADGATPG TIHEMESYHG MLACVIAGAG IALMPASMLN SMPGHHQVEA WPLAEKWRWL NTWLMWRRGA MTRQLEAFIE LLNAQLASVD
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