Gene SeAg_B1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1573 
Symbol 
ID6796824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp1535824 
End bp1537944 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content53% 
IMG OID642775812 
Productprobable TonB-dependent receptor yncD 
Protein accessionYP_002146448 
Protein GI197249632 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000253157 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA TTTCCGTTAG ACAGCGACTT TATCCCGCCC TCTTATTGCC TCTGACCTTC 
TCCCCGGTCC TTCAGGCCGC CAGCGCGCCC AATGAACAAA CCATGATAGT CACCGCAACG
CCGCAAACCG TATCCGAACT GGATACACCT GCCGCCGTTA GCGTCATTGA GGGAGAAGAC
ATGCGTCTGG CGACGCCGCG CGTCAATTTA TCTGAGTCTT TAACCAGCGT CCCGGGATTG
CAGGTGCAGA ACCGGCAGAA CTACGCGCAG GATCTGCAAA TCTCTATCCG TGGATTTGGC
TCGCGTTCCG CCTTTGGCGT GCGCGGCATT CGTCTGTATG TTGATGGCAT TCCCGCCACC
ATGCCGGATG GACAAGGCCA GATTTCGAAT ATTGATATTA ACAGCATACA AGACGTTGAA
GTGTTACGCG GCCCCTTCTC AGCGCTATAC GGCAATGCTT CCGGCGGCGT GATAAATGTC
ACCACCGAAA CCGGGAGACA GCCGCCCACC CTTGAGGCCA GCAGCTACTA CGGCAGTTAT
GGAAGCTGGC GCTATGGGCT AAAAGCCACG GGCGCGATGG GTGACGGCAC ACAGCCTGGC
GACGTGGATT ACACGGTATC GACTACCCGT TTCACCACCC ACGGCTACCG CGATCACAGC
GGCGCGCGAA AAAATCTGGC TAATGCCAAA CTGGGCGTGC GCCTTGACGA TGTCAGTAAA
CTCTCGCTGA TTTTTAATAG TGTGGACATT AAGGCGGACG ATCCCGGCGG ACTTACCGAA
TCTGAATGGA AAGCCGATCC GCAACAGGCG CCCCGCGCTG AACAGTACAA TACGCGTAAA
ACCATCAAAC AAACTCAGGC AGGATTGCGT TATGAACGTC AGCTCAGCGC GCAGGATGAT
ATCAGCGTGA TGGCCTACGC CGGAGAGCGG GAAACCACGC AATACCAGTC TATTCCCCTG
GTGGCACAGC TAAAACCAGC CCAGGCTGGC GGCGTAATTA CACTGCAACG CCACTATCAG
GGCATTGATT CCCGCTGGAC TCACCGGGGA GAATTAGGTG TGCCGGTCAC CTTCACTGGC
GGAGTAAATT ATGAAAATAT GAGCGAAAAC CGCAAGGGTT ACAATAACTT CCGCCTCAAC
AACGGCACCC CTGAGTTTGG GCATAAAGGC GATTTACGGC GGGATGAGCG TAACCTGATG
TGGAATGTCG ATCCTTATCT GCAAACCCAG TGGCAGCTTA CGCAAAAACT CTCGCTGGAT
GCTGGCGTGC GCTACAGTTC CGTGTGGTTC GATTCTAACG ATCACTATAT CGCGCCCGGC
AATGGCGATG ATAGCGGCGA CGCCAGCTAT CACCACTGGC TACCCGCCGG ATCGCTAAAA
TATGCGTTAA CTGACGCCTG GAATCTCTAT CTTGCTGCCG GTCGCGGATT TGAAACTCCC
ACAATCAATG AGCTTTCTTA TCGCGCTGAC GGCCAAAGCG GGTTCAACTT TGACCTCAAA
CCGTCGACCA ATGATACGGT GGAAGTCGGC AGTAAAACGC GGATTGGCAA TGGCTTGTTG
ACCGCCGCGT TATTTCAAAC CGATACCGAT GATGAAATTG TCGTCGCCAG CAGTATGGGA
GGACGCACTA CCTACAAAAA CGCGGGCAAA ACACGCCGCC AGGGCGCAGA GCTCGCGTTG
GACCAGCGCT TCGCCGGCGA CTGGCGGGTG AAAGCATCAT GGACCTGGCT GGATGCGACC
TATCGCAGTA ACGTTTGTCA GGGGCAAAAC TGTGATGGAA ACCGGATGCC CGGCATCGCC
CGTAATATGG GATTCGCCTC ATTAGGTTTT ATCCCGGATG AGGGGTGGTA CGCCGGAACA
GACGTTCGGT ATATGGGCGA TATCATGGCC AATGATGAAA ATACCGCCAA AGCGCCTTCG
TATACCGTTG TTGGACTAAA TACAGGGTAT AAATTTAATT ACAGTCAGCT TACCGTCGAT
ATTTTTGGGC GGGTAGATAA TCTATTTGAT AAAGAATATA TCGGTTCGGT GATCGTTAAT
GAATCTAATG GCCGATATTA TGAGCCAGCG CCAGGGCGTA ACTATGGCGT GGGGATTAAT
CTGGCATGGC AATTTGAATA A
 
Protein sequence
MKIISVRQRL YPALLLPLTF SPVLQAASAP NEQTMIVTAT PQTVSELDTP AAVSVIEGED 
MRLATPRVNL SESLTSVPGL QVQNRQNYAQ DLQISIRGFG SRSAFGVRGI RLYVDGIPAT
MPDGQGQISN IDINSIQDVE VLRGPFSALY GNASGGVINV TTETGRQPPT LEASSYYGSY
GSWRYGLKAT GAMGDGTQPG DVDYTVSTTR FTTHGYRDHS GARKNLANAK LGVRLDDVSK
LSLIFNSVDI KADDPGGLTE SEWKADPQQA PRAEQYNTRK TIKQTQAGLR YERQLSAQDD
ISVMAYAGER ETTQYQSIPL VAQLKPAQAG GVITLQRHYQ GIDSRWTHRG ELGVPVTFTG
GVNYENMSEN RKGYNNFRLN NGTPEFGHKG DLRRDERNLM WNVDPYLQTQ WQLTQKLSLD
AGVRYSSVWF DSNDHYIAPG NGDDSGDASY HHWLPAGSLK YALTDAWNLY LAAGRGFETP
TINELSYRAD GQSGFNFDLK PSTNDTVEVG SKTRIGNGLL TAALFQTDTD DEIVVASSMG
GRTTYKNAGK TRRQGAELAL DQRFAGDWRV KASWTWLDAT YRSNVCQGQN CDGNRMPGIA
RNMGFASLGF IPDEGWYAGT DVRYMGDIMA NDENTAKAPS YTVVGLNTGY KFNYSQLTVD
IFGRVDNLFD KEYIGSVIVN ESNGRYYEPA PGRNYGVGIN LAWQFE