Gene SeAg_B1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1572 
Symbol 
ID6795093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp1535092 
End bp1535757 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content47% 
IMG OID642775811 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002146447 
Protein GI197247904 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.247698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGGTA CGGAAAAAAC ACAACATATA AGCCTGACCA CACAGGTTGA AAATCGGTTA 
AAGCATCAAT TGTCTATTGG CGCATTAAAA CCAGGCGCAA GGCTTATCAC TAAAAATATC 
GCTCAAGAGT TAGGCGTCAG TATTACGCCG GTGCGTGAGG CCCTGTTAAG GCTGGTCTCT 
TCCAGTGCTT TGGCGGTGGC GCCAGCACAG GCGTTTATGG TGCCGGAGAT CTCGCTGGAA 
AGTTTGCTGG AAATTAATAC GATTCGTACT GCCCTGGAGG AGATGGCGGT GGTCGCCGCT 
GCGGGTAAGA TTACCCCGGA TCGCGAGCAG ACGCTGAATA CGCTATTAGA TGAATTTCAA 
CAGGCGCTGG AAAGTGGCGT TATGGAGAAA ATTCTTTTGG CCAACCGCGC ATTCCGCTTT 
GAGATCTACC ACTACGCGGA TATGCCAACG CTGTATGCCA TGATCGAGCA ATTATGGGTA 
CGCCTGGGGC CAAGCCTGCA TTTTTTATAT GATAATTTTA AACTTGATGA TTATCAAAAC 
GGCGTTAATC TGTACAGAAA ATTGCTTAAT GCGTTAGTGA CTGGTGATAA AGAAGCCAGT 
CGCCACTGCC TACAGAACGT TTTGCAACAA AACGTAGCGA CGATTAAAAA TCAGTACTTC 
ATGTAA
 
Protein sequence
MPGTEKTQHI SLTTQVENRL KHQLSIGALK PGARLITKNI AQELGVSITP VREALLRLVS 
SSALAVAPAQ AFMVPEISLE SLLEINTIRT ALEEMAVVAA AGKITPDREQ TLNTLLDEFQ 
QALESGVMEK ILLANRAFRF EIYHYADMPT LYAMIEQLWV RLGPSLHFLY DNFKLDDYQN 
GVNLYRKLLN ALVTGDKEAS RHCLQNVLQQ NVATIKNQYF M