Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1157 |
Symbol | |
ID | 6795339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 1152128 |
End bp | 1153612 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642775420 |
Product | cytoplasmic alpha-amylase |
Protein accession | YP_002146061 |
Protein GI | 197251788 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00381479 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACC CCACGTTATT GCAGTACTTC CACTGGTATT ATCCCGACGG CGGTAAACTC TGGTCTGAGC TGGCGGAACG TGCTGATGGG CTGAATGATA TCGGTATCAA TATGGTCTGG CTACCGCCCG CCTGTAAAGG CGCCTCCGGC GGCTATTCCG TAGGCTATGA TACCTACGAC CTGTTTGACC TCGGCGAATT TGACCAAAAA GGAACTATCG CGACAAAGTA CGGCGATAAA CGCCAGTTAC TGACGGCGAT AGACGCGCTC AAAAAAAATA ATATTGCGGT GCTGCTCGAC GTCGTCGTGA ACCACAAAAT GGGCGCAGAC GAAAAAGAAC GTATTCGCGT TCAGCGCGTG AATCAGGATG ACCGCACGCA AATCGATGAC AACATCATTG AATGCGAAGG CTGGACGCGC TACACCTTCC CTGCCCGCGC GGGCCAGTAT TCCAACTTTA TTTGGGACTA TCACTGTTTC AGCGGCATTG ATCACATCGA GAATCCCGAC GAAGACGGCA TTTTTAAGAT CGTCAATGAC TATACCGGCG ATGGCTGGAA CGATCAGGTT GATGATGAGA TGGGTAATTT CGACTATCTG ATGGGTGAAA ATATCGATTT TCGCAATCAC GCGGTTACGG AAGAGATTAA ATATTGGGCT CGTTGGGTCA TGGAACAAAC CCACTGTGAC GGCTTTCGCC TGGACGCGGT AAAACATATA CCCGCCTGGT TTTATAAAGA ATGGATTGAT CATGTACAGG CGGTTGCGCC AAAACCGCTG TTTATTGTCG CAGAATACTG GTCGCATGAA GTGGATAAAC TGCAAACGTA CATCGATCAG GTCGACGGGA AAACCATGCT GTTCGACGCG CCGTTGCAGA TGAAATTTCA CGAGGCCTCG CGCCAGGGCG CGGAGTATGA CATGCGCCAC ATTTTCACCG GCACGCTGGT AGAAGCCGAC CCTTTTCATG CGGTGACGCT GGTCGCTAAC CATGATACAC AACCGTTACA GGCGCTGGAA GCGCCGGTAG AACCCTGGTT CAAACCATTG GCCTATGCGC TGATCTTGCT TCGTGAAAAC GGCGTACCGT CAGTGTTTTA TCCCGATTTA TACGGCGCCA GCTATGAGGA TAGCGGCGAA AATGGCGAGA CCTGTCGGGT CGACATGCCG GTGATTAACC AACTGGATCG GCTGATCCTT GCTCGTCAGC GTTTTGCGCA CGGTATACAA ACTCTCTTTT TCGATCATCC TAACTGTATC GCCTTTAGTC GCAGCGGTAC TGAAGAGAAT CCAGGCTGTG TGGTTGTACT TTCCAATGGC GACGACGGTG AAAAAACCCT CCTGCTCGGC GACAATTACG CTAACAAGAC CTGGCGTGAT TTTCTGGGAA ACCGCAGTGA GCATGTTGTA ACTAATGATC AAGGCGAAGC GACGTTCTTC TGCAACGCAG GCAGCGTCAG CGTGTGGGTC ATTGAGGACG TGTGA
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Protein sequence | MKNPTLLQYF HWYYPDGGKL WSELAERADG LNDIGINMVW LPPACKGASG GYSVGYDTYD LFDLGEFDQK GTIATKYGDK RQLLTAIDAL KKNNIAVLLD VVVNHKMGAD EKERIRVQRV NQDDRTQIDD NIIECEGWTR YTFPARAGQY SNFIWDYHCF SGIDHIENPD EDGIFKIVND YTGDGWNDQV DDEMGNFDYL MGENIDFRNH AVTEEIKYWA RWVMEQTHCD GFRLDAVKHI PAWFYKEWID HVQAVAPKPL FIVAEYWSHE VDKLQTYIDQ VDGKTMLFDA PLQMKFHEAS RQGAEYDMRH IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL AYALILLREN GVPSVFYPDL YGASYEDSGE NGETCRVDMP VINQLDRLIL ARQRFAHGIQ TLFFDHPNCI AFSRSGTEEN PGCVVVLSNG DDGEKTLLLG DNYANKTWRD FLGNRSEHVV TNDQGEATFF CNAGSVSVWV IEDV
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