| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1114 |
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| Symbol | |
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| ID | 6793164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | + |
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| Start bp | 1114691 |
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| End bp | 1116832 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642775381 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_002146022 |
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| Protein GI | 197248170 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACAG GATTACGTTT CACACTGGAG GTGGACGGCC TGCCACCGGA TGCGCTGGTC
GTGGAGTCCT TTCACCTGAG CCAGTCCCTT TCCACGTTAT TTTCCCTCGA TATCTCGCTG
GTCAGCCAGC AGCTGCTTAA TATTGACTTC TCCCAGGTAC TGGAACAACC GGCGCACCTG
AAAATCTGGC AGGGCACGGA GATACAGCGC CGGGTGAACG GCATCGTGAC CTGGTTTGAG
CAGGGGGAAA ACGACGGACA CCAGATGCTG TACAGCATGA AAGTTCGCCC GCCGGTGTGG
CGCGCCGCGC TGCGCCAGAA CTCGCGTATT TTCCAGAACG AAGACATAAA AAGCATTCTC
GGGACGATAC TGCAGGAAAA CGGCGTGACG GACTGGAGCC CGCTGTTCAG CGAGCCGCAT
CCGGCGCGGG AGTTCTGCGT GCAGTACAGC GAAACGGATT ACGACTTTCT GGCGCGGATG
GCGGCGGAGG AAGGTATTTT CTTTTACGAG GAACATGCGC AGACCAGCGA CGACCAGAGC
CTGGTGCTGT GCGACACGGT GCGTTTTCTG CCGGAAGCCT TTGAAATCCC ATGGAACCCG
AACACCCGCA CCGAGGTGAG CACGCCGTGC GTCAGCCAGT TCCGCCACAG CGCGCAAATC
CGCCCCTCCT CCGTCATCGG CAAGGACTAC ACCTTCAAAC GCCCCGGCTG GGCAGGCCGC
TTTGAGCATC AGGGTGAACA TCAGGATTAC CAGCGCACGC AGTACGAGGT GTTTGACTAT
CCGGGGCGCT TCAAGGACGG CCACGGTCAG AACTTCACCC GCTGGCAGAT GGAGGGCTGG
CGTAATAATG CCGAAGTGGC GCAGGGGAAA AGCCGTTCGC CGGCGATATG GCCGGGACGG
CGTATTCAGC TGACGGAACA CCCACAGGCG AGCCTGAACC GGGAATGGCA GGTGGTGAGC
AGTGATTTAC ACGGCAGCCA GCCGCAGGCG GCGGCGGGGC GTTCAGGCTC CGGGACGAGC
CTTGAAAACC ATTTTACGGT CATTCCGGCG GACAGGACAT GGCGGCCACG CCCGCTGCCC
AAACCGTCAG TGGACGGCCC GCAGTCGGCA GTGGTCACCG GCCCGGAAGG GGAAGAAATC
TTCTGCGACG AACATGGGCG GGTACGGGTG AAATTTAACT GGGACCGGTA TAACCCGGCG
AACCAGGACA GCTCGTGCTG GATACGGGTG GTACAGGCGT GGGCGGGGCC GGGGTTCGGC
AACCTGGCGA TACCGCGGGT GGGGCAGGAA GTGATAGTGG ACTTCCTCAA CGGCGACCCG
GACCAGCCCA TCATCATGGG GCGCACCTAC CACCAGGAAA ACCGCTCGCC GGGCAGCCTG
CCGGGCACTA AAACGCAGAT GACCATCCGC TCGAAAACCT ATAAAGGCAG CGGGTTTAAC
GAACTCATGT TCGATGATGC GACAGGGAAG GAGCGGGTGT ATATCCACGC GCAGAAGAAC
ATGAATACCG AGGTGCTGCA CAACCGCACC ACCGATGTGA CGAATAACCA TGCTGAAACC
ATTGGCAATA ACCAGGTGAT CGCTGTCACC AATAACCAGA TACAGACCAT CGGCGTCAAC
CAGATCCAGA ACGTTGGCGT CAACCAGGTG GAGAAAGTGG GCAGCAATCA GGTGATCAAG
GTGGGGACAA ACCAGATTGA AACGGTGGGA CTCCTCCGCG CCCTGAATGT GGGCGTGGTG
TACCAGACTA CGGTGGGCGC CATTATGAAC ACCTCAGTGG CCATGATGCA GTCTTCACAG
GTGGGCCTGC ATAAATCGCT GATGGTGGGG ATGGGGTACA GCGTTAATGT GGGGAACAAA
GTCACCTTCT CGGTGGGGAA AACAAGGTCA GACAATGCCG GGCAGACAGC GATTTATTCT
GCGGGTGAAC ATCTGGAGCT TCGCTGCGGT AAAGCCCGGC TGGTAATGAC GAAGGACGGA
AAAATTTTCC TTAACGGAAC GAAAATTGAT CTGGAAGGTG CGGAAAGCGT CAATGGTGAT
GCGCTGACGA TCAACTGGAA CTGCGGCGCA ACAGAAACCG TGCCGGATGC GCCGAAGGAT
GACTCGCCGG AGCCGAAGAT GCCGGATATG AGGAAGTTCT GA
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| Protein sequence | MSTGLRFTLE VDGLPPDALV VESFHLSQSL STLFSLDISL VSQQLLNIDF SQVLEQPAHL
KIWQGTEIQR RVNGIVTWFE QGENDGHQML YSMKVRPPVW RAALRQNSRI FQNEDIKSIL
GTILQENGVT DWSPLFSEPH PAREFCVQYS ETDYDFLARM AAEEGIFFYE EHAQTSDDQS
LVLCDTVRFL PEAFEIPWNP NTRTEVSTPC VSQFRHSAQI RPSSVIGKDY TFKRPGWAGR
FEHQGEHQDY QRTQYEVFDY PGRFKDGHGQ NFTRWQMEGW RNNAEVAQGK SRSPAIWPGR
RIQLTEHPQA SLNREWQVVS SDLHGSQPQA AAGRSGSGTS LENHFTVIPA DRTWRPRPLP
KPSVDGPQSA VVTGPEGEEI FCDEHGRVRV KFNWDRYNPA NQDSSCWIRV VQAWAGPGFG
NLAIPRVGQE VIVDFLNGDP DQPIIMGRTY HQENRSPGSL PGTKTQMTIR SKTYKGSGFN
ELMFDDATGK ERVYIHAQKN MNTEVLHNRT TDVTNNHAET IGNNQVIAVT NNQIQTIGVN
QIQNVGVNQV EKVGSNQVIK VGTNQIETVG LLRALNVGVV YQTTVGAIMN TSVAMMQSSQ
VGLHKSLMVG MGYSVNVGNK VTFSVGKTRS DNAGQTAIYS AGEHLELRCG KARLVMTKDG
KIFLNGTKID LEGAESVNGD ALTINWNCGA TETVPDAPKD DSPEPKMPDM RKF
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