Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1100 |
Symbol | |
ID | 6795214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 1098898 |
End bp | 1100310 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642775367 |
Product | type VI secretion-associated protein, family |
Protein accession | YP_002146008 |
Protein GI | 197248442 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTAC GCGACCCGAA TACCTGGATT TCGCACCTGC TGGAAAATCT GCCGGATGAC AAACTGGCCT GCGCGCTGAA AGACGATAAT CCCGGCTGGG AATATATCGA CGGCGAAATG CTTAAACTCG GCTCGCTGGC GCACAGCCAG CTGGATATCC CGGAAATTCA GCGCCGGGGG CTGGTGATCC TGGCCTCGGA AAGCAAGGAT TTTCGCCTGC TGGCCCATCT GCTGCGCACC CTGCAACATG CCGGTGATCC GCTGCTGGCG CTGCGTCTGC TGGCGCTGTA CGTGGAGCAT TACTGGACTG TGGCGGCACC GCAAAATGCG GCACATAAAC AGCGTTTCGC CACCCAGGTG CTGAAACGCT TTGAAACCGG CGTGGAGAGT TTCGCAGAGA CAGCCCGTAC CGCGCAGCGC GACAGCCTGC TGGCTGAACT GGCGAAACTG GCGCAGCGCT GGCAGGAGCA GAATATCCCG GCGCTGACAC AGGCCGTCGA TGACCTCTCG TCGCAGTATC GCCGGGCATT TCGCGGGGCC GCCCCGGTGC CGCCAGCGGC TGGCCCGTCC ACGCATCCGG CTCCGGTTTC GGCCACGCCG TCCGCCCCGG TATCACCGTC TGCGCCTGCG GCGACGACGG CGCCAGCGGT GGATATCGAC AGCCATGACG ACAAAGCCTG GCGCGACACG CTGCTGAAAG TGGCCGCCAT TCTCTGTGAG CGCCAGCCGG ATTCACCGCA GGGCTACCGC CTGCGCCGCC ATGCGTTATG GCAGGCCATT ACATCCGTCC CCCAAGCCGA AAGCGACGGG CGCACACCGC TGGCGGCGGT GCCTGCCGAC ATGACCGCCG ATTACCAGGC GCGGCTGAAC AACGCCGATC TGGCGCTCTG GCAACAGGTG GAAAAAAGCC TGCTGCTGGC CCCGTACTGG CTCGATGGTC ATTACCTTTC AGCGCAGGCC GCACAACGCC TGGGCTACAC CAGCGCGGCA GAAGCCATCC GGGATGAGGT GGTCCGTTTT CTCGCCCGCC TGCCGCAACT TGCCACCCTG CTGTTTAATG ACCGCACGCC GTTTATCAGC GAACAGACAA AACAGTGGCT GGCGGCGTCT CCGGGTAGTC AGACAGCCCC GATGGTGCGG ACCAGTGAAG ACACCGAGGC TGTCCGCCAG TGTTTCAGCG AGCAGGGGCT GGAGGCCGCG CTGCGATACC TGGAAACCCT GCCGGAAGGC GATCCGCGCG ATCGGTTCCA CCGGCAGTAT CTTGGCGCGC AACTGTTAGA AGAAGCCGGG ATGGCGCAAC TGGCACAGCA ACAGTACCGG ATGTTGTTTA AAGCAGGGCT GCGCATGACG CTGGCTGAAT GGGAGCCGTC CCTGCTGGAA CAACTGGAAA ACAAACTCAC GGCAGAACAG TAA
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Protein sequence | MDLRDPNTWI SHLLENLPDD KLACALKDDN PGWEYIDGEM LKLGSLAHSQ LDIPEIQRRG LVILASESKD FRLLAHLLRT LQHAGDPLLA LRLLALYVEH YWTVAAPQNA AHKQRFATQV LKRFETGVES FAETARTAQR DSLLAELAKL AQRWQEQNIP ALTQAVDDLS SQYRRAFRGA APVPPAAGPS THPAPVSATP SAPVSPSAPA ATTAPAVDID SHDDKAWRDT LLKVAAILCE RQPDSPQGYR LRRHALWQAI TSVPQAESDG RTPLAAVPAD MTADYQARLN NADLALWQQV EKSLLLAPYW LDGHYLSAQA AQRLGYTSAA EAIRDEVVRF LARLPQLATL LFNDRTPFIS EQTKQWLAAS PGSQTAPMVR TSEDTEAVRQ CFSEQGLEAA LRYLETLPEG DPRDRFHRQY LGAQLLEEAG MAQLAQQQYR MLFKAGLRMT LAEWEPSLLE QLENKLTAEQ
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