| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1028 |
|---|
| Symbol | ompA |
|---|
| ID | 6795396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 1030515 |
|---|
| End bp | 1031630 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642775298 |
|---|
| Product | outer membrane protein A |
|---|
| Protein accession | YP_002145940 |
|---|
| Protein GI | 197248715 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000286695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTATCTC GTTGGAGATA TTCATGGCGT ATTTTGGATG ATAACGAGGC GCAAAAAATG
AAAAAGACAG CTATCGCGAT TGCAGTGGCA CTGGCTGGTT TCGCTACCGT AGCGCAGGCC
GCTCCGAAAG ATAACACCTG GTACGCTGGT GCTAAACTGG GCTGGTCTCA GTACCATGAC
ACCGGCTTCA TTAACAATGA TGGCCCGACT CATGAAAACC AACTGGGCGC AGGTGCTTTT
GGTGGTTACC AGGTTAACCC GTACGTTGGC TTTGAAATGG GCTACGACTG GTTAGGCCGT
ATGCCGTACA AAGGCGACAA CATCAATGGC GCTTATAAAG CTCAGGGCGT TCAGTTGACC
GCTAAACTGG GTTATCCAAT CACTGACGAT CTGGACGTTT ATACCCGTCT GGGTGGTATG
GTATGGCGTG CAGACACCAA GTCTAACGTC CCTGGCCCTG GCGGCGCGTC TAATAAAGAC
CACGACACCG GCGTTTCCCC GGTATTCGCG GGCGGTATCG AGTATGCTAT CACCCCTGAA
ATCGCAACCC GTCTGGAATA CCAGTGGACT AACAACATCG GTGATGCCAA CACCATCGGC
ACCCGTCCGG ACAACGGCCT GCTGAGCGTA GGTGTTTCCT ACCGTTTCGG CCAGCAAGAA
GCTGCTCCGG TAGTAGCACC GGCACCGGCA CCGGCTCCGG AAGTACAGAC CAAGCACTTC
ACTCTGAAGT CTGACGTACT GTTCAACTTC AACAAATCTA CCCTGAAGCC GGAAGGCCAG
CAGGCTCTGG ATCAGCTGTA CAGCCAGCTG AGCAACCTGG ATCCGAAAGA CGGTTCCGTT
GTCGTTCTGG GCTTCACTGA CCGTATCGGT TCTGACGCTT ACAACCAGGG TCTGTCCGAG
AAACGTGCTC AATCTGTTGT TGATTACCTG ATCTCCAAAG GTATTCCGTC TGACAAAATC
TCCGCACGTG GTATGGGCGA ATCTAACCCG GTTACCGGCA ACACCTGTGA CAACGTGAAA
CCTCGCGCTG CCCTGATCGA TTGCCTGGCT CCGGATCGTC GCGTAGAGAT CGAAGTTAAA
GGCGTTAAAG ACGTGGTAAC TCAGCCGCAG GCTTAA
|
|---|
| Protein sequence | MLSRWRYSWR ILDDNEAQKM KKTAIAIAVA LAGFATVAQA APKDNTWYAG AKLGWSQYHD
TGFINNDGPT HENQLGAGAF GGYQVNPYVG FEMGYDWLGR MPYKGDNING AYKAQGVQLT
AKLGYPITDD LDVYTRLGGM VWRADTKSNV PGPGGASNKD HDTGVSPVFA GGIEYAITPE
IATRLEYQWT NNIGDANTIG TRPDNGLLSV GVSYRFGQQE AAPVVAPAPA PAPEVQTKHF
TLKSDVLFNF NKSTLKPEGQ QALDQLYSQL SNLDPKDGSV VVLGFTDRIG SDAYNQGLSE
KRAQSVVDYL ISKGIPSDKI SARGMGESNP VTGNTCDNVK PRAALIDCLA PDRRVEIEVK
GVKDVVTQPQ A
|
|---|
| |