| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B1008 |
|---|
| Symbol | asnC |
|---|
| ID | 6792516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 1006868 |
|---|
| End bp | 1008268 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642775278 |
|---|
| Product | asparaginyl-tRNA synthetase |
|---|
| Protein accession | YP_002145920 |
|---|
| Protein GI | 197249609 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000354576 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTG TGCCTGTAGC CGACGTACTC CAGGGCCGCG TAGCCGTTGA CCAAGAAGTC
ACCGTGCGCG GATGGGTGCG TACCCGCCGA GATTCAAAAG CTGGCATCTC CTTCCTCGCC
GTTTATGACG GCTCCTGCTT TGATCCTGTA CAGGCTGTCA TTAATAATTC TCTGCCCAAT
TATAATGAAG AAGTATTACA CCTGACGACA GGCTGCTCCG TGGTAGTAAC AGGTAAGGTT
GTCGCGTCGC CGGGACAGGG GCAAAGTTTT GAAATCCAGG CTACGAAAGT AGAGGTCGCA
GGCTGGGTGG AAGATCCGGA TACCTACCCG ATGGCGGCAA AACGCCATAG CATTGAGTAT
CTGCGTGAAG TCGCGCATCT GCGCCCGCGC ACCAACCTGA TTGGCGCGGT AGCGCGCGTC
CGCCATACTC TGGCGCAGGC GCTGCATCGC TTCTTCGATG AGCAGGGTTT CTTTTGGGTC
TCTACCCCGC TGATTACCGC TTCCGATACC GAAGGCGCTG GCGAAATGTT CCGCGTCTCA
ACGTTGGATC TGGAAAACCT GCCGCGTAAC GACCAGGGCA GAGTAGATTT TGACAAAGAC
TTTTTTGGCA AAGAATCATT CCTGACCGTC TCCGGCCAGC TCAACGGTGA AACGTATGCC
TGTGCGCTGT CCAAAATCTA TACTTTTGGG CCGACCTTCC GCGCGGAAAA TTCCAACACC
AGCCGCCACC TGGCGGAGTT CTGGATGCTG GAGCCGGAAG TGGCGTTCGC CGATCTGGAA
GACAACGCCC GTCTGGCGGA AGCCATGCTG AAATATGTCT TCAACGCGGT TCTGGAAGAG
CGTGCGGATG ACATGAAGTT CTTTGCCGAA CGCGTGGATA AAGACGCTAT CGCTCGTCTG
GAGCGTTTTG TCTCCACCGA CTTCGCTCAG GTGGATTACA CCGATGCGGT CGCCATTCTG
GAACGCTGTG GTAAGACATT TGAAAACCCG GTGTTCTGGG GCGTCGACCT CTCTTCCGAA
CACGAACGCT ATCTGGCGGA AGAGCATTTC AAAGCGCCGG TAGTGGTGAA AAACTATCCG
AAGGAAATTA AAGCGTTTTA CATGCGCCTT AACGAAGATG GCAAAACCGT GGCGGCCATG
GATGTGCTGG CGCCGGGAAT CGGCGAAATC ATCGGTGGTT CCCAGCGTGA AGAGCGTCTG
GATGTGCTGG ATGCCCGTAT GGCCGAAATG GGGCTGAATA AAGAGGATTA CTGGTGGTAT
CGCGACTTGC GTCGCTACGG TACTGTACCG CATTCCGGCT TTGGCCTGGG CTTTGAACGC
CTTATCGCTT ACGTCACGGG TGTGCAAAAC GTGCGCGATG TTATTCCGTT CCCACGGACC
CCACGCAACG CCAGCTTCTG A
|
|---|
| Protein sequence | MSVVPVADVL QGRVAVDQEV TVRGWVRTRR DSKAGISFLA VYDGSCFDPV QAVINNSLPN
YNEEVLHLTT GCSVVVTGKV VASPGQGQSF EIQATKVEVA GWVEDPDTYP MAAKRHSIEY
LREVAHLRPR TNLIGAVARV RHTLAQALHR FFDEQGFFWV STPLITASDT EGAGEMFRVS
TLDLENLPRN DQGRVDFDKD FFGKESFLTV SGQLNGETYA CALSKIYTFG PTFRAENSNT
SRHLAEFWML EPEVAFADLE DNARLAEAML KYVFNAVLEE RADDMKFFAE RVDKDAIARL
ERFVSTDFAQ VDYTDAVAIL ERCGKTFENP VFWGVDLSSE HERYLAEEHF KAPVVVKNYP
KEIKAFYMRL NEDGKTVAAM DVLAPGIGEI IGGSQREERL DVLDARMAEM GLNKEDYWWY
RDLRRYGTVP HSGFGLGFER LIAYVTGVQN VRDVIPFPRT PRNASF
|
|---|
| |