Gene SeAg_B1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B1006 
Symbol 
ID6795483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp1005171 
End bp1006262 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content51% 
IMG OID642775276 
Productouter membrane protein F 
Protein accessionYP_002145918 
Protein GI197251029 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00715949 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGC GCAAAATCCT GGCAGCGGTG ATCCCTGCCC TGCTGGCTGC TGCAACCGCA 
AACGCAGCAG AAATTTATAA TAAAGATGGT AATAAGCTGG ATCTGTACGG TAAAGCCGTG 
GGTCGTCACG TATGGACAAC GACCGGCGAT AGCAAAAATG CCGACCAGAC TTATGCCCAG 
ATTGGTTTTA AAGGGGAAAC GCAGATTAAC ACCGATCTGA CCGGTTTCGG TCAGTGGGAA 
TACCGTACTA AAGCAGACCG CGCTGAAGGC GAACAGCAGA ACTCGAATCT GGTCCGTCTG 
GCTTTCGCGG GTTTGAAATA CGCGGAAGTG GGTTCAATCG ATTATGGTCG TAACTACGGT 
ATCGTTTACG ATGTTGAATC CTATACCGAT ATGGCCCCCT ACTTCTCCGG CGAAACCTGG 
GGCGGCGCCT ATACCGATAA CTACATGACC AGCCGTGCTG GCGGTTTGTT GACCTACCGT 
AACTCTGACT TCTTTGGTCT GGTGGACGGT CTCTCTTTCG GTATCCAGTA TCAGGGTAAA 
AATCAGGACA ACCACAGCAT TAACTCTCAG AATGGCGATG GCGTAGGTTA CACCATGGCA 
TATGAGTTCG ACGGCTTTGG CGTCACCGCA GCGTACAGCA ACAGCAAGCG TACTAACGAT 
CAGCAGGATC GCGATGGTAA TGGCGATCGC GCAGAATCAT GGGCCGTTGG CGCGAAATAT 
GATGCAAACA ACGTCTACCT GGCTGCCGTA TATGCTGAAA CCCGCAATAT GAGCATTGTT 
GAAAATACGG TTACCGATAC CGTGGAAATG GCAAACAAAA CGCAGAACCT GGAAGTGGTC 
GCTCAGTACC AGTTTGACTT CGGCCTGCGT CCGGCAATCT CGTATGTGCA GAGTAAAGGT 
AAGCAGTTGA ACGGCGCCGA CGGCTCGGCC GATCTGGCGA AATATATTCA GGCGGGCGCG 
ACTTACTACT TCAACAAAAA CATGAACGTA TGGGTTGACT ACCGTTTCAA CCTGCTGGAC 
GAAAACGACT ACAGCTCCAG CTACGTTGGC ACCGACGATC AGGCGGCTGT CGGTATTACT 
TACCAGTTCT GA
 
Protein sequence
MMKRKILAAV IPALLAAATA NAAEIYNKDG NKLDLYGKAV GRHVWTTTGD SKNADQTYAQ 
IGFKGETQIN TDLTGFGQWE YRTKADRAEG EQQNSNLVRL AFAGLKYAEV GSIDYGRNYG 
IVYDVESYTD MAPYFSGETW GGAYTDNYMT SRAGGLLTYR NSDFFGLVDG LSFGIQYQGK 
NQDNHSINSQ NGDGVGYTMA YEFDGFGVTA AYSNSKRTND QQDRDGNGDR AESWAVGAKY 
DANNVYLAAV YAETRNMSIV ENTVTDTVEM ANKTQNLEVV AQYQFDFGLR PAISYVQSKG 
KQLNGADGSA DLAKYIQAGA TYYFNKNMNV WVDYRFNLLD ENDYSSSYVG TDDQAAVGIT 
YQF