Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1001 |
Symbol | |
ID | 6794601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 1000404 |
End bp | 1002251 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642775271 |
Product | hypothetical protein |
Protein accession | YP_002145913 |
Protein GI | 197248211 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.040014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCTTA ATAAGATGTG TGGTCGTTGT CTGTCGGCAA TCAGTTTATG CCTGGCCGTA ACATTCGCTC CACTGTTCAA TGCGCAGGCC GATGAGCCTG AAATGATACC TGGCGATAGC GCCGTTGCCG CGACGGATCA GGCTGGGCCG CAGAAGCAAT CCGCCGCGAC GGCGATTATG GCCGGGATTC AGCCGCTGCC GGAGGGCGTT TCAGCCGAGA AAGTCCGGGC TGATTTACAG TCGCAGCTTC CTTCCGGCTA TACGCCGGTT TATATGAGCC AACTGACATT GCTGTATGCC GCGCGCGACA TGAAGCCCAT GTGGGATAAT CGCGATGCGG TGAAAGCCTT CCAGCAACAG TTGGCGGAGG TGGCGATTGC CGGATTCCAG CCGCAGTTTA CCGCCTGGGT GGCATTGTTG ACCGATCCCG CCGTAAACGG TATGGCGCGC GATGTTGTGT TGTCAGACGC CATGATGGGC TATCTCCATT TCATTGCGAA TATCCCCGTC AAAGGCCAGC GCTGGTTATA TAGCAACAAA CCTTACGCAT TGGCGACGCC GCCAGTCTCG GTGATTAACC AGTGGCAAAT CGCGCTGGAA GAGGGCCAGT TGCCGATGTT TGTCGCCAGC CTGGCGCCGC AGCATCCACA GTATGCGCCC ATGCATGACG CGTTGCTGAA GCTGGTGGCG GACTCTCGCC CGTGGCCGCA GTTGGCCAAT ACCGCGACGC TGCGCCCGGG GCAATGGAGT AACGATGTGC CTGCGCTGCG CGAAATATTA CAGCGTACGG GGATGCTGGA TGGCGGTCCA AAGATAGCCT TACCGGGCGA TAACACTGCT GATAGCGCCG TCGTCAGCCC CTCCGCCGTG GTCGACGAAA CATCGGTGGC GCAGCCGGTC GACGAACAAA CGGCCCGCCG TAGTAAGCCG GCTCCGGCGG CACGCGCCTA CGATCGTGAA CTGGTCGAGG CGGTAAAGCG TTTTCAGGCA TGGCAAGGGC TGGGGGCGGA TGGCGTTATT GGCCCGGCGA CGCGTAACTG GCTTAATATG ACCCCCGCGC AACGCGCAGG CGTACTGGCA CTGAATATCC AACGTTTACG CCTGCTGCCG GCGGAACTCT CTACCGGTAT TATGGTAAAC ATTCCCGCTT ATTCGCTGGT CTACTATCAG AATGGCAACC AGGTGCTGGC TTCGAGGGTG ATCGTCGGGC GTCCCGATCG TAAAACGCCG ATGATGAGCA GCGCGCTGAA TAATGTGGTG GTGAACCCGC CGTGGAACGT TCCGCCCACG CTTGCGCGTA AAGACATTTT ACCGAAGGTG TGGAATGACC CAGGCTATCT GGAGCGCCAT GGCTACACCG TGATGCGCGG CTGGAACAGC AAAGAAGCGA TCGATCCGTG GCAGGTTGAC TGGACCACCA TTACGCCATC GAATCTTCCG TTCCGTTTCC AGCAGGCGCC AGGCGCGCAC AATTCGCTGG GGCGTTATAA ATTTAATATG CCGAGCTCAG ATGCGATCTA TCTGCACGAT ACGCCTAACC ATACTCTCTT TCAGCGTGAC GCCAGGGCGT TAAGTTCCGG CTGCGTGCGG GTCAATAAGG CCTCTGAGCT GGCGAATATG CTCTTGCAGG ATGCTGGCTG GAACGATGCG CGGATCTCAG GCGCCCTGAA GCAAGGCGAC ACGCGGTATG TCAATATCCG GCAGAACATT CCAGTAAATC TTTACTATCT GACCGCGTTT GTCGGCGCAG ATGGACGTAT GCAATATCGT ACAGATATTT ACAATTACGA TCTCACAGCG CGATCCAGCG CACAAATTGT GCCAAAGGTT GAACAATTAA TCAGGTAA
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Protein sequence | MLLNKMCGRC LSAISLCLAV TFAPLFNAQA DEPEMIPGDS AVAATDQAGP QKQSAATAIM AGIQPLPEGV SAEKVRADLQ SQLPSGYTPV YMSQLTLLYA ARDMKPMWDN RDAVKAFQQQ LAEVAIAGFQ PQFTAWVALL TDPAVNGMAR DVVLSDAMMG YLHFIANIPV KGQRWLYSNK PYALATPPVS VINQWQIALE EGQLPMFVAS LAPQHPQYAP MHDALLKLVA DSRPWPQLAN TATLRPGQWS NDVPALREIL QRTGMLDGGP KIALPGDNTA DSAVVSPSAV VDETSVAQPV DEQTARRSKP APAARAYDRE LVEAVKRFQA WQGLGADGVI GPATRNWLNM TPAQRAGVLA LNIQRLRLLP AELSTGIMVN IPAYSLVYYQ NGNQVLASRV IVGRPDRKTP MMSSALNNVV VNPPWNVPPT LARKDILPKV WNDPGYLERH GYTVMRGWNS KEAIDPWQVD WTTITPSNLP FRFQQAPGAH NSLGRYKFNM PSSDAIYLHD TPNHTLFQRD ARALSSGCVR VNKASELANM LLQDAGWNDA RISGALKQGD TRYVNIRQNI PVNLYYLTAF VGADGRMQYR TDIYNYDLTA RSSAQIVPKV EQLIR
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