Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0987 |
Symbol | rpsA |
ID | 6794791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 981175 |
End bp | 982848 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642775257 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_002145899 |
Protein GI | 197251361 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0123742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT CTTTTGCTCA ACTCTTTGAA GAATCCTTAA AAGAAATCGA AACCCGCCCG GGTTCCATCG TTCGTGGTGT TGTTGTTGCT ATCGACAAAG ACGTAGTACT GGTTGACGCC GGTCTGAAAT CTGAGTCTGC CATTCCGGCT GAGCAGTTCA AAAACGCCCA GGGCGAACTG GAAATCCAGG TTGGTGACGA AGTTGACGTT GCTCTGGATG CAGTAGAAGA CGGCTTCGGT GAAACTCTGC TCTCTCGTGA GAAAGCTAAA CGTCACGAAG CATGGATCAC GCTGGAAAAA GCTTACGAAG ATGCTGAAAC TGTTACCGGT GTTATCAACG GCAAAGTTAA GGGTGGCTTC ACTGTTGAGC TGAACGGTAT TCGCGCGTTC CTGCCAGGTT CTCTGGTAGA CGTTCGTCCG GTGCGTGACA CTCTGCACCT GGAAGGCAAA GAGCTTGAAT TCAAAGTAAT CAAGCTGGAC CAGAAACGTA ACAACGTTGT GGTTTCTCGT CGTGCCGTTA TCGAATCCGA AAACAGCGCA GAACGCGATC AGCTGCTGGA AAACCTGCAG GAAGGCATGG AAGTTAAAGG TATCGTTAAG AACCTCACTG ACTACGGTGC ATTCGTTGAT CTGGGCGGCG TTGACGGCCT GCTGCACATC ACTGATATGG CCTGGAAACG CGTTAAGCAT CCGAGCGAAA TCGTGAACGT TGGCGACGAA ATCAACGTGA AAGTGCTGAA ATTCGACCGC GAGCGTACCC GTGTATCCCT GGGCCTGAAA CAGCTGGGCG AAGATCCGTG GGTTGCTATC GCTAAACGTT ATCCGGAAGG TACCAAACTG ACCGGTCGCG TGACCAACCT GACCGACTAC GGCTGCTTCG TTGAAATCGA AGAAGGCGTT GAAGGCCTGG TTCACGTTTC CGAAATGGAC TGGACCAACA AAAACATCCA CCCGTCCAAA GTGGTTAACG TTGGCGACGT AGTGGAAGTG ATGGTTCTGG ATATCGACGA AGAACGTCGT CGTATCTCCC TGGGTCTGAA GCAGTGCAAA TCTAACCCGT GGCAGCAGTT CGCAGAAACC CACAACAAGG GCGACCGCGT TGAAGGTAAA ATCAAGTCTA TCACTGACTT CGGTATCTTC ATCGGCCTGG ACGGCGGCAT CGACGGCCTG GTTCACCTGT CTGACATCTC CTGGAACGTT GCAGGCGAAG AAGCAGTTCG TGAATACAAA AAAGGCGACG AAATCGCTGC AGTTGTTCTG CAGGTTGACG CAGAACGTGA ACGTATCTCC CTGGGCGTTA AACAGCTCGC AGAAGATCCG TTCAACAACT GGGTTGCTCT GAACAAGAAA GGCGCTATCG TAACCGGTAA AGTCACTGCA GTTGACGCGA AAGGCGCAAC CGTAGAACTG GCTGACGGCG TTGAAGGTTA CCTGCGTGCT TCTGAAGCAT CCCGTGACCG CGTTGAAGAT GCGACTCTGG TTCTGAGCGT TGGCGACGAC GTTGAAGCTA AATTCACCGG CGTTGATCGT AAAAACCGCG CAATCAGCCT GTCTGTTCGT GCGAAAGACG AAGCTGACGA GAAAGATGCC ATCGCAACTG TTAACAAACA GGAAGATGCA AACTTCTCTA ACAACGCAAT GGCTGAAGCA TTCAAAGCAG CTAAAGGCGA GTAA
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Protein sequence | MTESFAQLFE ESLKEIETRP GSIVRGVVVA IDKDVVLVDA GLKSESAIPA EQFKNAQGEL EIQVGDEVDV ALDAVEDGFG ETLLSREKAK RHEAWITLEK AYEDAETVTG VINGKVKGGF TVELNGIRAF LPGSLVDVRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESENSA ERDQLLENLQ EGMEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE INVKVLKFDR ERTRVSLGLK QLGEDPWVAI AKRYPEGTKL TGRVTNLTDY GCFVEIEEGV EGLVHVSEMD WTNKNIHPSK VVNVGDVVEV MVLDIDEERR RISLGLKQCK SNPWQQFAET HNKGDRVEGK IKSITDFGIF IGLDGGIDGL VHLSDISWNV AGEEAVREYK KGDEIAAVVL QVDAERERIS LGVKQLAEDP FNNWVALNKK GAIVTGKVTA VDAKGATVEL ADGVEGYLRA SEASRDRVED ATLVLSVGDD VEAKFTGVDR KNRAISLSVR AKDEADEKDA IATVNKQEDA NFSNNAMAEA FKAAKGE
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