| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0919 |
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| Symbol | rumB |
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| ID | 6795719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | + |
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| Start bp | 909849 |
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| End bp | 910976 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642775193 |
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| Product | 23S rRNA methyluridine methyltransferase |
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| Protein accession | YP_002145836 |
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| Protein GI | 197251768 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02085] 23S rRNA (uracil-5-)-methyltransferase RumB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.983812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTGCG CACTCTATGA CGCGGGTCGC TGCCGTTCCT GTCAATGGAT TACGCAGTCG
GTTAACGAAC AACTTTCCGC AAAAACAGCC GATTTACATC GTTTGCTCGC CGGGCTGCCT
GTTGAACAGT GGTGCGCGCC GACTGGAGGC CCGGAACAGC GTTTCCGCAA CAAAGCGAAA
ATGGTCGTGA GCGGTAGTGT AGAAAAACCG CTCTTCGGGA TGCTGCATCG CGACGGTACG
CCGGTCGATC TTTGCGGCTG CCCGCTGTAT CCCGCCTCCT TTGCCCCCGT ATTCAGCGCG
CTAAAACCTT TTATTGCCCG TGCCGGACTC ACGCCTTATA ACGTGGCGCG AAAACGTGGC
GAACTGAAAT ACCTGTTGCT GACGGAAAGT CAGTTCGATG GCGGCATGAT GCTACGCTTC
GTGTTGCGTT CAGAAACCAA ACTTACGCAA CTGCGCGCGG CGTTACCGTG GCTGCGTGCG
CAACTGCCGC AGCTCAAAGT GATCACCGCA AATATTCAGC CGGTACATAT GGCGATTATG
GAAGGGGAGA CGGAAATCTA CCTGACGGAT CAGCAGGCGC TGGCGGAACG TTTTAACGAT
GTGCCGCTGT GGATTCGTCC GCAAAGTTTC TTTCAGACCA ACCCTACGGT CGCCAGCCGA
TTATATGCGA CGGCGCGCGA CTGGGTAGGG CAACTGCCGG TACGCCATAT GTGGGATCTT
TTTTGCGGAG TGGGCGGATT CGGCCTGCAC TGCGCGACGC CGCAGATGCA ATTAACCGGT
ATTGAGATCG CGCCGGAGGC GATTGCCTGC GCGAAGCAAT CCGCTGCCGA GCTGGGATTG
ACCCGCCTTC ATTTCCAGGC GCTGGATTCC ACCCAATTCG CCACCGCACA AGGTGAAACG
CCCGACCTGG TGTTGGTGAA TCCTCCCCGC CGCGGCATTG GCAAGCCGTT GTGCGATTAC
CTTGCACAAA TGGCGCCGCG TTTTATTATT TATTCAAGCT GTAACGCGCA GACGATGGCG
CAGGATATTC GTCATCTGCC GAACTACCGT ATTCAACGTG TTCAGCTTTT CGATATGTTC
CCGCATACCG CGCATTATGA AGTGTTAACA CTGCTTTGCA GGCTGTAG
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| Protein sequence | MQCALYDAGR CRSCQWITQS VNEQLSAKTA DLHRLLAGLP VEQWCAPTGG PEQRFRNKAK
MVVSGSVEKP LFGMLHRDGT PVDLCGCPLY PASFAPVFSA LKPFIARAGL TPYNVARKRG
ELKYLLLTES QFDGGMMLRF VLRSETKLTQ LRAALPWLRA QLPQLKVITA NIQPVHMAIM
EGETEIYLTD QQALAERFND VPLWIRPQSF FQTNPTVASR LYATARDWVG QLPVRHMWDL
FCGVGGFGLH CATPQMQLTG IEIAPEAIAC AKQSAAELGL TRLHFQALDS TQFATAQGET
PDLVLVNPPR RGIGKPLCDY LAQMAPRFII YSSCNAQTMA QDIRHLPNYR IQRVQLFDMF
PHTAHYEVLT LLCRL
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