Gene SeAg_B0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B0784 
SymboltolB 
ID6793377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp779903 
End bp781198 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content56% 
IMG OID642775061 
Producttranslocation protein TolB 
Protein accessionYP_002145709 
Protein GI197250927 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.03788e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAGC AGGCATTACG AGTAGCATTT GGTTTTCTGA TGCTGTGGGC GGCAGTGCTG 
CACGCAGAAG TCCGTATCGA GATCACCCAG GGGGTGGACT CGGCGCGACC GATTGGCGTT
GTGCCTTTTA AATGGGCCGG GCCGGGCGCT GCGCCTGAAG ATATCGGTGG CATCGTGGCG
GCAGATTTAC GCAATAGCGG TAAATTTAAT CCGCTAGACC GGTCCCGACT GCCGCAGCAG
CCAGCCACCG CTCAGGAAGT TCAGCCTACC GCATGGTCTG CGCTGGGTAT TGATGCCGTC
GTCGTTGGGC AGGTAACGCC GAATCCGGAC GGTTCCTACA ATGTTGCTTA TCAGCTGGTT
GACACTGGCG GCGCGCCGGG GACTGTACTG GCGCAAAACT CTTATAAAGT GAACAAGCAG
TGGCTGCGTT ATGCAGGCCA TACCGCCAGT GACGAAGTCT TTGAAAAACT GACGGGCATT
AAGGGCGCGT TCCGTACTCG TATCGCCTAT GTGGTACAGA CTAATGGCGG TCAGTTCCCG
TATGAACTGC GTGTGTCGGA TTACGATGGT TACAATCAGT TTGTGGTGCA CCGTTCTCCG
CAGCCGTTGA TGTCTCCGGC GTGGTCTCCG GACGGCTCAA AACTGGCTTA CGTGACATTT
GAAAGCGGTC GCTCCGCGCT GGTTATCCAG ACGCTGGCAA ACGGCGCAGT GCGTCAGGTT
GCGTCCTTCC CGCGTCACAA CGGCGCGCCG GCCTTCTCGC CGGATGGGAC GAAACTGGCG
TTCGCGTTAT CGAAAACCGG AAGTCTGAAC CTGTACGTTA TGGATCTCGC CTCCGGCCAG
ATTCGTCAGA TAACGGACGG GCGTAGCAAC AATACGGAGC CGACCTGGTT CCCGGACAGC
CAGACTCTGG CCTTTACTTC TGACCAGGCT GGACGTCCGC AAGTGTATAA AATGAACATT
AACGGCGGTG CGGCGCAACG TATTACCTGG GAAGGTTCGC AAAACCAGGA TGCGGATGTC
AGCAGCGACG GTAAATTTAT GGTAATGGTA AGCTCAAATA ACGGGCAGCA GCACATTGCC
AAACAAGATC TGGTGACGGG GGGCGTACAG GTTCTGTCGT CAACGTTCCT GGATGAAACG
CCAAGTCTGG CACCTAACGG CACGATGGTA ATCTACAGCT CTTCTCAGGG GATGGGATCT
GTGCTGAATT TGGTTTCTAC AGATGGGCGT TTCAAAGCGC GTCTTCCGGC AACTGATGGT
CAGGTGAAAT CGCCTGCCTG GTCGCCGTAT CTGTGA
 
Protein sequence
MMKQALRVAF GFLMLWAAVL HAEVRIEITQ GVDSARPIGV VPFKWAGPGA APEDIGGIVA 
ADLRNSGKFN PLDRSRLPQQ PATAQEVQPT AWSALGIDAV VVGQVTPNPD GSYNVAYQLV
DTGGAPGTVL AQNSYKVNKQ WLRYAGHTAS DEVFEKLTGI KGAFRTRIAY VVQTNGGQFP
YELRVSDYDG YNQFVVHRSP QPLMSPAWSP DGSKLAYVTF ESGRSALVIQ TLANGAVRQV
ASFPRHNGAP AFSPDGTKLA FALSKTGSLN LYVMDLASGQ IRQITDGRSN NTEPTWFPDS
QTLAFTSDQA GRPQVYKMNI NGGAAQRITW EGSQNQDADV SSDGKFMVMV SSNNGQQHIA
KQDLVTGGVQ VLSSTFLDET PSLAPNGTMV IYSSSQGMGS VLNLVSTDGR FKARLPATDG
QVKSPAWSPY L