| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0769 |
|---|
| Symbol | sucA |
|---|
| ID | 6795240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 765856 |
|---|
| End bp | 768657 |
|---|
| Gene Length | 2802 bp |
|---|
| Protein Length | 933 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642775046 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_002145694 |
|---|
| Protein GI | 197248575 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACA GCGCTTTGAA AGCCTGGTTG GACTCTTCTT ACCTCTCTGG TTCGAATCAG
AGCTGGATAG AACAGCTCTA TGAAGACTTC TTAACCGATC CTGACTCGGT AGACGCTAAC
TGGCGTTTGA CGTTCCAGCA GTTACCTGGT ACCGGAGTCA AACCGGATCA ACTCCATTCA
AAAACACGTG AATATTTCCG GCGGCAGGCG TTGGCTGGCT CACGTCACTC TTCTACGATT
TCCGACCCTG ACACCAATGT GAAGCAGGTT AAAGTCCTGC AGCTTATCAA CGCTTATCGT
TTCCGTGGCC ATCAGCATGC AAACCTCGAT CCGCTGGGAC TGTGGAAGCA AGAACGCGTG
GCGGATCTGG ACCCTTCTTT CCATGATTTG ACCGAGGCCG ATTTCCAGGA AACCTTCAAT
GTCGGCTCCT TTGCCAGCGG CAAAGAGACG ATGAAGCTGG GCGAGCTGCT CGACGCGCTC
AAACAGACCT ACTGCGGCCC GATTGGCGCT GAGTATATGC ACATCACCAG CACCGAAGAG
AAACGCTGGA TCCAACAGCG CATCGAATCC GGTCGTGCGG CCTTTAGCGC TGACGAGAAA
AAACGTTTCC TGAACGAACT GACCGCCGCT GAAGGGCTGG AACGTTATCT GGGCGCCAAA
TTCCCGGGTG CGAAACGTTT CTCGCTCGAG GGGGGAGATG CGCTGATACC CATGCTGAAA
GAGATGGTTC GCCATGCGGG TAACAGCGGC ACTCGCGAAG TGGTGCTGGG GATGGCGCAC
CGCGGTCGCC TGAACGTGCT GATCAACGTA CTGGGTAAAA AACCGCAGGA TCTGTTCGAC
GAATTTGCCG GTAAGCATAA AGAACATCTG GGTACCGGCG ACGTGAAGTA TCACATGGGC
TTCTCGTCAG ATATCGAAAC CGAAGGCGGT CTGGTTCACC TGGCGCTGGC GTTTAACCCA
TCGCATCTGG AAATTGTGAG CCCGGTGGTG ATGGGCTCCG TGCGCGCCCG TCTGGACAGA
CTGGACGAAC CGAGCAGCAA CAAAGTGTTG CCGATTACTA TTCACGGCGA CGCCGCGGTG
ACCGGCCAGG GCGTGGTTCA GGAAACCCTG AACATGTCGA AAGCGCGCGG TTACGAAGTG
GGCGGTACGG TACGTATCGT TATCAACAAC CAGGTGGGCT TCACCACCTC TAACCCACTG
GATGCGCGTT CAACGCCTTA CTGCACCGAT ATCGGTAAAA TGGTCCAGGC GCCGATTTTC
CACGTCAATG CGGACGATCC GGAAGCCGTC GCTTTTGTGA CCCGTCTGGC GCTGGACTTC
CGTAATACCT TTAAACGCGA TGTGTTCATC GATCTGGTGT GCTACCGCCG TCACGGCCAC
AACGAAGCCG ACGAGCCAAG CGCAACCCAG CCGCTGATGT ACCAGAAAAT CAAAAAGCAT
CCGACGCCGC GTAAAATCTA CGCCGACAAA CTGGAAGCTG ATAAGGTCGC AACGCTGGAA
GATGCCACCG AAATGGTCAA CCTCTATCGC GATGCGCTGG ATGCAGGCGA ATGCGTGGTG
AAAGAGTGGC GTCCGATGAA TATGCACTCG TTCACCTGGT CGCCGTATCT AAACCACGAA
TGGGATGAAG CATACCCGAA CAAGGTAGAA ATGAAGCGTC TGCAGGAGCT GGCAAAACGT
ATCAGCACCG TGCCGGAAGC CATTGAAATG CAGTCTCGCG TGGCGAAAAT TTATGGCGAC
CGTCAGGCAA TGGCGGCAGG CGAGAAATTG TTTGACTGGG GCGGCGCGGA AAATCTGGCT
TACGCCACGC TGGTCGATGA AGGCATTCCG GTGCGCCTGT CCGGGGAAGA CTCCGGTCGC
GGCACCTTCT TCCATCGTCA TGCGGTGATC CACAACCAGA CGAACGGCTC AACGTATACG
CCGTTGCAGC ATATTCACAG CGGTCAGGGA CAGTTTAAAG TCTGGGACTC CGTGCTGTCT
GAAGAAGCGG TACTGGCTTT TGAATACGGT TATGCCACGG CGGAACCACG TACCCTGACT
ATCTGGGAAG CGCAGTTTGG CGATTTTGCC AACGGCGCGC AGGTAGTGAT TGACCAGTTC
ATCTCCTCCG GCGAGCAGAA ATGGGGCCGG ATGTGCGGTC TGGTGATGCT GTTGCCGCAT
GGCTATGAAG GGCAGGGCCC GGAGCACTCT TCCGCGCGTC TGGAACGTTA TCTGCAACTT
TGCGCCGAGC AGAATATGCA GGTTTGCGTG CCGTCCACCC CGGCGCAGGT CTACCATATG
CTGCGCCGTC AGGCGCTGCG CGGGATGCGT CGTCCGCTGG TGGTGATGTC GCCGAAATCG
CTGCTGCGTC ACCCGCTGGC GGTTTCCACG CTTGATGAAC TGGCGAACGG TTCCTTCCAG
CCGGCCATTG GCGAAATTGA CGAGCTGGAC CCTAAAGCCG TAAAACGCGT GGTAATGTGT
TCTGGTAAGG TTTATTACGA CCTGCTGGAA CAACGTCGCA AAAACGACCA GAAAGATGTC
GCTATCGTGC GCATCGAACA GCTCTATCCG TTCCCGCATA AAGCGGTGCA GGAAGCGCTG
CAACCATACG CTCACGTCCA TGATTTTGTC TGGTGCCAGG AAGAGCCGCT CAACCAGGGC
GCATGGTACT GCAGCCAGCA TCATTTCCGT GAAGTGATTC CGTTTGGGGC CGCTCTGCGT
TACGCAGGTC GCCCGGCCTC CGCCTCTCCG GCGGTAGGGT ATATGTCCGT TCACCAGAAA
CAGCAACAAG ATCTGGTTAA TGACGCGCTG AACGTCGATT AA
|
|---|
| Protein sequence | MQNSALKAWL DSSYLSGSNQ SWIEQLYEDF LTDPDSVDAN WRLTFQQLPG TGVKPDQLHS
KTREYFRRQA LAGSRHSSTI SDPDTNVKQV KVLQLINAYR FRGHQHANLD PLGLWKQERV
ADLDPSFHDL TEADFQETFN VGSFASGKET MKLGELLDAL KQTYCGPIGA EYMHITSTEE
KRWIQQRIES GRAAFSADEK KRFLNELTAA EGLERYLGAK FPGAKRFSLE GGDALIPMLK
EMVRHAGNSG TREVVLGMAH RGRLNVLINV LGKKPQDLFD EFAGKHKEHL GTGDVKYHMG
FSSDIETEGG LVHLALAFNP SHLEIVSPVV MGSVRARLDR LDEPSSNKVL PITIHGDAAV
TGQGVVQETL NMSKARGYEV GGTVRIVINN QVGFTTSNPL DARSTPYCTD IGKMVQAPIF
HVNADDPEAV AFVTRLALDF RNTFKRDVFI DLVCYRRHGH NEADEPSATQ PLMYQKIKKH
PTPRKIYADK LEADKVATLE DATEMVNLYR DALDAGECVV KEWRPMNMHS FTWSPYLNHE
WDEAYPNKVE MKRLQELAKR ISTVPEAIEM QSRVAKIYGD RQAMAAGEKL FDWGGAENLA
YATLVDEGIP VRLSGEDSGR GTFFHRHAVI HNQTNGSTYT PLQHIHSGQG QFKVWDSVLS
EEAVLAFEYG YATAEPRTLT IWEAQFGDFA NGAQVVIDQF ISSGEQKWGR MCGLVMLLPH
GYEGQGPEHS SARLERYLQL CAEQNMQVCV PSTPAQVYHM LRRQALRGMR RPLVVMSPKS
LLRHPLAVST LDELANGSFQ PAIGEIDELD PKAVKRVVMC SGKVYYDLLE QRRKNDQKDV
AIVRIEQLYP FPHKAVQEAL QPYAHVHDFV WCQEEPLNQG AWYCSQHHFR EVIPFGAALR
YAGRPASASP AVGYMSVHQK QQQDLVNDAL NVD
|
|---|
| |