| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0728 |
|---|
| Symbol | |
|---|
| ID | 6797220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 717478 |
|---|
| End bp | 718230 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642775005 |
|---|
| Product | UMP phosphatase |
|---|
| Protein accession | YP_002145653 |
|---|
| Protein GI | 197250120 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00149934 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCA AGAATGTAAT CTGCGATATC GACGGCGTGC TGATGCACGA CAACGTAGCC
GTACCCGGTG CGGCGGAATT TCTGACGGGG ATTCTGGAAA AAGGTCTGCC GCTGGTGCTG
CTGACCAATT ACCCGTCGCA AACCGGCCAG GATCTGGCGA ACCGTTTTGC TACCGCTGGC
GTTAACGTGC CGGACAGCGT GTTTTATACT TCAGCAATGG CGACAGCCGA TTTTCTGCGC
CGTCAGGAAG GTAAGAAAGC GTATGTCGTG GGCGAAGGCG CGCTCATTCA CGAGCTCTAT
AAAGCGGGTT TTACCATTAC CGATGTGAAC CCTGATTTTG TCATCGTTGG AGAGACCCGC
TCCTACAACT GGGACATGAT GCATAAAGCG GCATTTTTCG TCGCCAATGG CGCGCGCTTT
ATCGCCACCA ACCCGGATAC CCACGGTCGC GGCTTTTATC CGGCCTGCGG CGCGCTGTGC
GCAGGCATTG AAAAAATTTC CGGCCGGAAG CCGTTTTATG TCGGCAAACC CAGCCCGTGG
ATCATCCGCG CGGCGTTAAA CAAAATGCAG GCGCACTCGG AAGAGACCGT TATCGTCGGC
GACAATCTGC GCACCGACAT TCTGGCGGGG TTCCAGGCCG GTCTGGAGAC CATTCTGGTG
CTTTCTGGCG TATCAACAAT CAATGATATT GACAGTATGC CGTTCCGCCC AAGCTGGATT
TACCCTTCCG TCGCCGAGAT CGACGTTATC TAA
|
|---|
| Protein sequence | MTIKNVICDI DGVLMHDNVA VPGAAEFLTG ILEKGLPLVL LTNYPSQTGQ DLANRFATAG
VNVPDSVFYT SAMATADFLR RQEGKKAYVV GEGALIHELY KAGFTITDVN PDFVIVGETR
SYNWDMMHKA AFFVANGARF IATNPDTHGR GFYPACGALC AGIEKISGRK PFYVGKPSPW
IIRAALNKMQ AHSEETVIVG DNLRTDILAG FQAGLETILV LSGVSTINDI DSMPFRPSWI
YPSVAEIDVI
|
|---|
| |