| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0581 |
|---|
| Symbol | lpxH |
|---|
| ID | 6792590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 580591 |
|---|
| End bp | 581313 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642774862 |
|---|
| Product | UDP-2,3-diacylglucosamine hydrolase |
|---|
| Protein accession | YP_002145518 |
|---|
| Protein GI | 197247729 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000016997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACAC TGTTTATTGC AGACTTGCAT CTGCAAACGG AAGAACCGGC GATCGTCGCC
GGTTTTCTGC GTTTTTTAGC CGTAGAAGCC CGTCAGGCCG ACGCGCTGTA TATTCTTGGC
GATCTCTTCG AGGCCTGGAT TGGCGACGAC GACCCCAACC CGCTACATCG TGAGATAGCC
GCCGCCATCA AAGCGGTGGT GAATGTTGGC GTTCCCTGCT TCTTTATTCA TGGTAATCGC
GACTTCCTGA TTGGCAAACG CTTTGCCCGC GAAAGCGGCA TGATTCTACT GCCGCAGGAA
AAAGTGCTCG ATCTGTATGG CCGCAATGTG TTGATTATGC ACGGCGATAC GCTCTGTACC
GATGATGCCG GATATCAGGC GTTTCGCGCC AAAGTCCATA ATCCGTGGGT GCAACGACTG
TTCCTTACCC TGCCGCTGTT TATCCGCCGC CGTATCGCCG CCAGAATGCG CGCCGGCAGT
AAAGCCGCCA ACAGCAGCAA ATCGCTGGAT ATTATGGACG TCAATGCGCA GACCGTCGTC
GCCGAAATGG AAAAACACCG CGTACAGTGG CTGGTTCACG GTCACACCCA CCGCCCGGCG
GTACATGAAC TTTCCGTCAA CGACCAGCCC GCGTTCCGCG TGGTGTTAGG CGCATGGCAT
CATGAAGGTT CAATGGTAAA AGTCACGCCG GACAACGTGG AGTTAATCGC CTTCCCCCTG
TAA
|
|---|
| Protein sequence | MATLFIADLH LQTEEPAIVA GFLRFLAVEA RQADALYILG DLFEAWIGDD DPNPLHREIA
AAIKAVVNVG VPCFFIHGNR DFLIGKRFAR ESGMILLPQE KVLDLYGRNV LIMHGDTLCT
DDAGYQAFRA KVHNPWVQRL FLTLPLFIRR RIAARMRAGS KAANSSKSLD IMDVNAQTVV
AEMEKHRVQW LVHGHTHRPA VHELSVNDQP AFRVVLGAWH HEGSMVKVTP DNVELIAFPL
|
|---|
| |