Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0275 |
Symbol | |
ID | 6796171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 285765 |
End bp | 287906 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642774575 |
Product | lysine decarboxylase, constitutive |
Protein accession | YP_002145239 |
Protein GI | 197248168 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCA TCGCCATTAT GGGGCCGCAC GGGGTTTATT ATAAAGATGA ACCCATCAAG GAGCTTGAGC GTGCATTACA ATCCCTGGGA TTTCAAATTA TCTGGCCGCA AAATAGCGTT GACTTGTTGA AGTTTATTGA ACATAACCCG CGCATCTGCG GCGTTATTTT TGACTGGGAT GAATACAGTC TCGACCTTTG TAGCGAAATC AACCAGCTAA ATGAATACCT TCCTCTCTAC GCCTTTATCA ATACCAACTC CACGCTGGAC GTTAGCGTTC ACGATATGCG CATGGCGCTG TGGTTTTTTG AGTATGCATT GGGGCTGGCT GAAGATATCG CGACGCGCAT TCATCAATAT ACAAACGAAT ATCTCGATAA TATTACGCCG CCGTTTACCA AAGCGCTGTT TACCTACGCC AAAGAAGGAA AATATACCTT TTGTACGCCG GGTCATATGG CGGGAACGGC GTATCAGAAA AGCCCGCCAG GCTGTCTGTT TTATGACTTT TTTGGCGGCA ATACCTTAAA GGCCGATGTG TCGATTTCGG TGACTGAACT GGGATCGCTG CTGGATCACA CCGGGCCGCA TCTGGAAGCG GAAGAGTATA TCGCCCGTAC TTTTGGCGCC GAGCAGAGTT ATATGGTGAC GAACGGTACG TCGACCTCGA ATAAAATTGT CGGTATGTAT GCCGCGCCTG CGGGAAGTAC GCTACTTATT GATCGTAATT GCCATAAATC GCTGGCGCAT TTGCTGATGA TGAGCGATGT GGTGCCTCTC TGGTTGAAGC CGACGCGCAA TGCGCTCGGT ATTCTCGGCG GTATTCCTAA GCGTGAATTT ACCCGCGACA GCATTGCGCG TAAGGTGGCG GAAACCGCGC AGGCGCAATG GCCGGTTCAT GCGGTTATCA CCAATTCTAC TTACGATGGT CTGCTGTATA ACACTAACTG GATCAAGCAG ATGCTGGACG TTCCCTCGAT CCATTTTGAT TCCGCCTGGG TACCCTATAC CCATTTCCAT CCGATCTACC AGGGGAAAAG CGGGATGAGC GGCGATCGGG TGCCCGGAAA AGTGATTTTC GAAACGCAAT CCACCCATAA AATGCTGGCG GCTTTTTCGC AGGCGTCGCT TATTCATATC AAAGGGGAAT ATGACGAAGA GACGTTTAAC GAAGCGTTTA TGATGCACAC TTCCACATCG CCGAGCTATC CCATTGTCGC CTCTATCGAG ACCGCGGCGG CGATGCTGCG CGGCAATCCA GGGAAAAGAT TGATTAATCG TTCGGTGGAA CGGGCGCTCC ATTTTCGTAA AGAGGTACAG CGGCTACGTG AAGAGTCCGA TAGCTGGTTC TTTGATATCT GGCAGCCGGA AGAGGTTGAT GAGGCCGAAT GCTGGCCGGT CACGCCGGGA GAAACCTGGC ATGGCTTCAC CGATGCTGAT GACGATCATA TGTTTCTCGA TCCGGTTAAG GTGACAATCC TGACGCCGGG GATGGATGAA CAGGGCAACA TGAGCGAAGA GGGGATACCC GCCGCGCTGG TGGCGAAGTT CCTCGATGAG CGAGGCGTGG TGGTGGAAAA AACCGGGCCG TATAATCTGC TGTTTTTGTT CAGCATAGGG ATTGATAAGA CCCGTGCGAT GGGGCTGCTG CGCGGACTGA CGGAATTTAA ACGCGCCTAC GATCTTAACC TGCGCGTCAA AAATATGTTG CCGGATCTGT ATGCGGAAGA TCCGGATTTT TATCGCAATA TGCGCATTCA GGATCTGGCG CAGGGGATCC ATAAACTGAT CCGCCAGCAC GATCTTCCGG GGCTGATGCT GCGGGCGTTC GAGGTTTTAC CGGAGATGAT CATGACCCCG CACCAGGCTT GGCAGCGTCA GATCAAAGGC GAGGTGGAAA CCGTGGCGCT CGATCAACTG CCAGGGCGCG TTTCCGCGAA TATGCTCCTG CCTTATCCGC CAGGCGTTCC GCTGTTGATG CCCGGCGAGA GGATTACGCA ACAGAGTCGG GCCGTGCTCG ATTTTCTGCT GATGCTCTGC TCGATTGGCC AGCATTATCC CGGTTTTGAA ACGGATATTC ACGGCGCGAA ACGGAATGAA GACGGGGTGT ACCAGGTACG AGTCTTAAAA CACGCCTGTT AG
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Protein sequence | MNIIAIMGPH GVYYKDEPIK ELERALQSLG FQIIWPQNSV DLLKFIEHNP RICGVIFDWD EYSLDLCSEI NQLNEYLPLY AFINTNSTLD VSVHDMRMAL WFFEYALGLA EDIATRIHQY TNEYLDNITP PFTKALFTYA KEGKYTFCTP GHMAGTAYQK SPPGCLFYDF FGGNTLKADV SISVTELGSL LDHTGPHLEA EEYIARTFGA EQSYMVTNGT STSNKIVGMY AAPAGSTLLI DRNCHKSLAH LLMMSDVVPL WLKPTRNALG ILGGIPKREF TRDSIARKVA ETAQAQWPVH AVITNSTYDG LLYNTNWIKQ MLDVPSIHFD SAWVPYTHFH PIYQGKSGMS GDRVPGKVIF ETQSTHKMLA AFSQASLIHI KGEYDEETFN EAFMMHTSTS PSYPIVASIE TAAAMLRGNP GKRLINRSVE RALHFRKEVQ RLREESDSWF FDIWQPEEVD EAECWPVTPG ETWHGFTDAD DDHMFLDPVK VTILTPGMDE QGNMSEEGIP AALVAKFLDE RGVVVEKTGP YNLLFLFSIG IDKTRAMGLL RGLTEFKRAY DLNLRVKNML PDLYAEDPDF YRNMRIQDLA QGIHKLIRQH DLPGLMLRAF EVLPEMIMTP HQAWQRQIKG EVETVALDQL PGRVSANMLL PYPPGVPLLM PGERITQQSR AVLDFLLMLC SIGQHYPGFE TDIHGAKRNE DGVYQVRVLK HAC
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